DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tadr and CAT6

DIOPT Version :9

Sequence 1:NP_724308.2 Gene:tadr / 35370 FlyBaseID:FBgn0032911 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_196097.1 Gene:CAT6 / 830355 AraportID:AT5G04770 Length:583 Species:Arabidopsis thaliana


Alignment Length:493 Identity:103/493 - (20%)
Similarity:182/493 - (36%) Gaps:126/493 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DVLCSGSGARLALGASVISYLIVYNEAS----APSLLVGVVLATVYGAMAARCKTSLRSLQMP-- 66
            |::..|.|..:..|..|.:     ..||    .||::|...:|.:...::|.|.|.. ::.:|  
plant    65 DLIGLGIGGMVGAGVFVTT-----GRASRLDAGPSIVVSYAIAGLCALLSAFCYTEF-AVHLPVA 123

  Fly    67 -----YVRATNKF-DFSCLFLAIWLDALATVCACAALARTLSACLDAMTG---GLARILILGRNA 122
                 |:|.|  | :|...|....| .:..|.:.||::|:.:|.|....|   ...|.::.|...
plant   124 GGAFSYIRIT--FGEFPAFFTGANL-VMDYVMSNAAVSRSFTAYLGTAFGISTSKWRFVVSGLPK 185

  Fly   123 PANEPWPDVLGVSVVFLVTGMFMLGLEHSRAFSLILTLGMFGLNAILSAVGWWRGDMLAWSA--- 184
            ..||  .|.:.|.||.::|.:.......|...::|:|.........:..:|:.:||....|:   
plant   186 GFNE--IDPVAVLVVLVITVIICCSTRESSKVNMIMTAFHIAFIFFVIVMGFIKGDSKNLSSPAN 248

  Fly   185 ---DSYFQPDGISSVFLGTALLTYSFPG----------------DWPQQLRGGRFTATLITGLVS 230
               .|.|.|.|.:.||.|.|::..|:.|                |.|..:.|.       ..:|:
plant   249 PEHPSGFFPFGAAGVFNGAAMVYLSYIGYDAVSTMAEEVENPVKDIPVGVSGS-------VAIVT 306

  Fly   231 TSLLLTAICLSTVVHYRSQEDYVAVPLFNILD-----------ENGFH---KLVPASACMLLLTS 281
            ....|.|:.:|.::.|            :::|           .||:.   |:|...|...:|||
plant   307 VLYCLMAVSMSMLLPY------------DLIDPEAPFSAAFRGSNGWEWVTKVVGIGASFGILTS 359

  Fly   282 SAAFLELFPELYGIVVRLATSEW-------RILSKQISYESSESGNPVLAVFIAGSMCAMLAFAC 339
            .            :|..|..:.:       |::....:....::..||.|....|...|.||...
plant   360 L------------LVAMLGQARYMCVIGRSRVVPFWFAKIHPKTSTPVNASTFLGIFTAALALFT 412

  Fly   340 PLQHLSYTLAAGHMGGVFLRA---LYLLYIPYRPKYMAPS-------SESSLSYSRL-STAPFAK 393
            .|..|...::.|.:...::.|   ::..|:|..|....|:       |.:||.::.: ...|..|
plant   413 DLNVLLNLVSIGTLFVFYMVANALIFRRYVPVGPTKPWPTLCFLTLFSITSLVFTLIWKLVPEGK 477

  Fly   394 SSSY---SSAATSSSSRL----------KRSLWKIGLP 418
            ..::   :||..:.:..|          |..||  |:|
plant   478 PKAFMLGASAVVAIAIVLSFQCVVPQARKPELW--GVP 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tadrNP_724308.2 2A0303 5..>209 CDD:273330 54/221 (24%)
CAT6NP_196097.1 2A0303 51..562 CDD:273330 103/493 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43243
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.