DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tadr and Slc7a4

DIOPT Version :9

Sequence 1:NP_724308.2 Gene:tadr / 35370 FlyBaseID:FBgn0032911 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001100548.1 Gene:Slc7a4 / 303787 RGDID:1305905 Length:635 Species:Rattus norvegicus


Alignment Length:686 Identity:140/686 - (20%)
Similarity:235/686 - (34%) Gaps:218/686 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLLDVLCSGSGARLALGASVISYLIVYNEASAPSLLVGVVLATVYGAMAARCKTSLRSLQMPYVR 69
            |.||:...|.|..:..|..|::..:. .:.:.|::|:..::|.|...:||.|.... ..::|...
  Rat    38 STLDLTLLGVGGMVGSGLYVLTGTVA-KDMAGPAVLLSFLVAAVASLLAALCYAEF-GARVPRTG 100

  Fly    70 ATNKFDFSCL-----FLAIWLDALATVCACAALARTLSACLDAMTGGLARILILGR----NAPAN 125
            :...|.:..:     ||..|...|..:...||:||..|..|||:.....|......    ..|..
  Rat   101 SAYLFTYVSMGEIWAFLIGWNVLLEYLIGGAAVARAWSGYLDAIFNHSIRNFTESHMGVWQMPFL 165

  Fly   126 EPWPDVLGVSVVFLVTGMFMLG------LEHS-RAFSLILTLGMFGLNAILSAVGWWRGDMLAWS 183
            ..:||.|...::.:.:.....|      |.|: .|.|||:.|.:..|..||:....|..:     
  Rat   166 AHYPDFLAAGILLVASAFVSCGARVSSWLNHTFSAISLIVILFIIVLGFILARPHNWSAE----- 225

  Fly   184 ADSYFQPDGISSVFLGTALLTYSFPG-----DWPQQLRGGRFTATLITGLVSTSLLLTA---ICL 240
             :..|.|.|.|.:..|||...|:|.|     ...::.:..|:...:   .::.||.|.|   |.:
  Rat   226 -EGGFAPFGFSGILAGTATCFYAFVGFDVIAASSEEAKNPRWAVPM---AIAISLGLAAGAYILV 286

  Fly   241 STVVHYRSQEDYVAVPLFNILDENGFHKLVPASACMLLLTSSAAFLELFPELYGIVVRLATSEWR 305
            |||:       .:.||         :|.|.|.||.      :.||   :...||         | 
  Rat   287 STVL-------TLMVP---------WHSLDPDSAL------ADAF---YRRGYG---------W- 316

  Fly   306 ILSKQISYESSESGNPVLAVFI--AGSMCAM----LAFACPLQHLSYTLAAGHMGGVFLRALYLL 364
                              |.||  .||:|||    |:....|..:.|.:||   .|:|    :.:
  Rat   317 ------------------AGFIVAVGSICAMNTVLLSNLFSLPRIVYAMAA---DGLF----FQV 356

  Fly   365 YIPYRPKYMAP------------------SSESSLSYSRLSTAPFAKSSSYSSAATSSSSRLKRS 411
            :....|:...|                  ..|:.:.:..:.|.     .:|:..|||...     
  Rat   357 FARVHPRTQVPVVGILVFGVLMALLALLMDLEALVQFLSIGTL-----LAYTFVATSIIV----- 411

  Fly   412 LWKIGLPKHSNLKKPKTKPRNKQELEKEWLLLGEPTSPCPQREGRDVESTILSDGEPPPSDFEYP 476
                       |:..|..|               |:||||...|..|:                 
  Rat   412 -----------LRFQKASP---------------PSSPCPASPGPTVK----------------- 433

  Fly   477 DKFDKSDSDTSTDIDAIVDEYREKIKVTTAGPLERSVRVP-----------TVSSWRVTIFAIVV 530
             |:| |.||....:||:      :..::..|.|..::: |           |..:|.:.|.....
  Rat   434 -KYD-SFSDHIQLVDAV------QASMSEPGQLRPALK-PFLGFLDGLSPGTAVTWALGILIASA 489

  Fly   531 IGLGIALCIAGLMMH---WAPAALTGGIGVLIVTIMMGFI--------------PKYTGSVINVS 578
            |.|...|......:|   |         |.:::.::.|.:              .|.....|.:.
  Rat   490 ISLACVLVFGNSALHLPRW---------GYVLLLVVSGAVFLSSLLVLGAHQQQKKQDTFQIPLV 545

  Fly   579 PVICGMSLLMGVILFSGCAIHSWPGLLIWLMAGLIL 614
            |:...:|:|:.:.|....:..:|...:.||:.||::
  Rat   546 PLTPALSILLNLCLMLKLSYLTWLRFIFWLLVGLVV 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tadrNP_724308.2 2A0303 5..>209 CDD:273330 54/219 (25%)
Slc7a4NP_001100548.1 2A0303 14..592 CDD:273330 140/686 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.