DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9265 and rdh10a

DIOPT Version :10

Sequence 1:NP_610081.3 Gene:CG9265 / 35369 FlyBaseID:FBgn0032910 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001074052.2 Gene:rdh10a / 562840 ZFINID:ZDB-GENE-070112-2242 Length:339 Species:Danio rerio


Alignment Length:277 Identity:110/277 - (39%)
Similarity:152/277 - (54%) Gaps:39/277 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 EKELNTDIALITGGGNGLGRLLAERLGKMGTKVVIWDINKKGIAETVQIVEE------------- 132
            ||.:...:.:|||.|.|||||.|:...:....:|:||||.....||.::|.:             
Zfish    31 EKSVAGQVCVITGAGGGLGRLFAKEFARRRATLVLWDINSHSNEETAEMVRQIYREQDNPMSKEG 95

  Fly   133 -AGG-----------YCKGYVVDISKKEEVYKAADVIRDEVGDITLLINNAGVVSGLHLLDTPDH 185
             .||           |.  ||:|:.|:|.||..|:.:|.|||::.|||||||||||.|||:.||.
Zfish    96 AVGGVEEVPPFQPQVYT--YVLDVGKRESVYSTAEKVRKEVGEVDLLINNAGVVSGHHLLECPDE 158

  Fly   186 LIERSFNVNVMAHFWTTKAFLPKMIENDRGHIATIASLAGHVGISKLVDYCASKFAAVGFDEALR 250
            ||||:..||..|||||||||||||:|.:.|||.|:||..|....:.:.|||||||.|:||.|:|.
Zfish   159 LIERTMVVNCHAHFWTTKAFLPKMLEMNHGHIVTVASSLGLFSTAGVEDYCASKFGAIGFHESLS 223

  Fly   251 LELEVLGHTNIRTTCICPFFIQATGMFDDVNAR-----WVPTLNPNDVADRVIAAIRKNEKLAVI 310
            .|::......|:.|.:||:.:. ||||.....|     ::|.|.|.....:.:.||..::.:...
Zfish   224 HEIQASEKDGIKMTLVCPYLVD-TGMFRGCRIRKEIEPFLPPLRPEFCVKQAMRAILTDQPMICT 287

  Fly   311 P------GFLKVLLSFK 321
            |      .|:|.:|.|:
Zfish   288 PRIVYMVNFMKSILPFE 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9265NP_610081.3 17beta-HSDXI-like_SDR_c 88..328 CDD:187598 108/270 (40%)
rdh10aNP_001074052.2 17beta-HSDXI-like_SDR_c 38..305 CDD:187598 108/270 (40%)

Return to query results.
Submit another query.