DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9265 and hsd17b12

DIOPT Version :10

Sequence 1:NP_610081.3 Gene:CG9265 / 35369 FlyBaseID:FBgn0032910 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001017234.1 Gene:hsd17b12 / 549988 XenbaseID:XB-GENE-945229 Length:320 Species:Xenopus tropicalis


Alignment Length:191 Identity:56/191 - (29%)
Similarity:92/191 - (48%) Gaps:15/191 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 ALITGGGNGLGRLLAERLGKMGTKVVIWDINKKGIAETV-QIVEEAGGYCKGYVVDISKKEEVY- 151
            |::||..:|:|:..||.|.|.|..:|:...:.:.:.|.. ||.|:.....|....|..|..|:| 
 Frog    59 AVVTGATDGIGKAYAEELAKRGMNIVLISRSPEKLEEVAKQIKEKFKVETKIIAADFGKPTEIYG 123

  Fly   152 KAADVIRD-EVGDITLLINNAGVVSGLH---LLDTPD--HLIERSFNVNVMAHFWTTKAFLPKMI 210
            :....:|| |:|   :|:||.| ||..|   .|:.||  :.:::..|:|:.:....|:..||.|:
 Frog   124 RIESGLRDLEIG---VLVNNVG-VSYEHPEYFLEIPDLENTLDKMININITSVCQMTRLVLPGML 184

  Fly   211 ENDRGHIATIASLAGHVGISKLVDYCASKFAAVGFDEALRLELEVLGHTNIRTTCICPFFI 271
            ...||.|..|:|.:|...:..|..|.|:|.....|...|:.|....|   :....:.||::
 Frog   185 GRGRGVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLQAEYRSKG---VTVQSVLPFYV 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9265NP_610081.3 17beta-HSDXI-like_SDR_c 88..328 CDD:187598 56/191 (29%)
hsd17b12NP_001017234.1 17beta-HSD1_like_SDR_c 56..297 CDD:187614 56/191 (29%)

Return to query results.
Submit another query.