DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9265 and rdh10

DIOPT Version :9

Sequence 1:NP_001260655.1 Gene:CG9265 / 35369 FlyBaseID:FBgn0032910 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001011091.1 Gene:rdh10 / 496504 XenbaseID:XB-GENE-944961 Length:341 Species:Xenopus tropicalis


Alignment Length:304 Identity:112/304 - (36%)
Similarity:161/304 - (52%) Gaps:40/304 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VAW-FIICCIGYILQDLYYIAFGYPEKELNTDIALITGGGNGLGRLLAERLGKMGTKVVIWDINK 120
            |.| |::....::::.        .:|.:...:.||||.|:|||||.|....:...::|:||||.
 Frog    14 VLWAFVLAAAKWLVRP--------KDKSVAGQVCLITGAGSGLGRLFALEFARRRAQLVLWDINS 70

  Fly   121 KGIAETVQIV---------------------EEAGGYCK----GYVVDISKKEEVYKAADVIRDE 160
            :...||.::|                     ||....|.    .|..|:.|:|.||..|:.:|.|
 Frog    71 QSNEETAEMVRSIYRELEAEDSARRAGNATEEEVQPCCNFQVYTYTCDVGKRESVYSTAERVRRE 135

  Fly   161 VGDITLLINNAGVVSGLHLLDTPDHLIERSFNVNVMAHFWTTKAFLPKMIENDRGHIATIASLAG 225
            |||:.||:||||||||.|||:.||.||||:..||..|||||||||||||:|.:.|||.::||..|
 Frog   136 VGDVYLLLNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPKMMEMNHGHIVSVASSLG 200

  Fly   226 HVGISKLVDYCASKFAAVGFDEALRLELEVLGHTNIRTTCICPFFIQATGMFDDVNAR-----WV 285
            ....:.:.|||||||..|||.|:|..||:......|:||.:||:.:. ||||.....|     ::
 Frog   201 LFSTAGVEDYCASKFGVVGFHESLSHELKAADKDGIKTTLVCPYLVD-TGMFRGCRIRKEIEPFL 264

  Fly   286 PTLNPNDVADRVIAAIRKNEKLAVIPGFLKVLLSFKWTFPWGCV 329
            |.|.|:....:.:.||..::.:...|..:.::...|...|:..|
 Frog   265 PPLKPDYCVKQAMRAILTDQPMICTPRLMYIVTCMKSILPFEAV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9265NP_001260655.1 fabG 82..299 CDD:235546 103/246 (42%)
17beta-HSDXI-like_SDR_c 88..328 CDD:187598 107/269 (40%)
rdh10NP_001011091.1 17beta-HSDXI-like_SDR_c 38..307 CDD:187598 107/269 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 1 1.000 - - otm48356
Panther 1 1.100 - - O PTHR24322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1734
SonicParanoid 1 1.000 - - X140
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.050

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