DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9265 and Rdh10

DIOPT Version :9

Sequence 1:NP_001260655.1 Gene:CG9265 / 35369 FlyBaseID:FBgn0032910 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_852143.1 Gene:Rdh10 / 353252 RGDID:727793 Length:341 Species:Rattus norvegicus


Alignment Length:304 Identity:111/304 - (36%)
Similarity:159/304 - (52%) Gaps:40/304 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VAW-FIICCIGYILQDLYYIAFGYPEKELNTDIALITGGGNGLGRLLAERLGKMGTKVVIWDINK 120
            |.| |::....::::.        .||.:...:.||||.|:|||||.|....:....:|:||||.
  Rat    14 VLWAFVLAAARWLVRP--------KEKSVAGQVCLITGAGSGLGRLFALEFARRRALLVLWDINT 70

  Fly   121 KGIAETVQIV---------------------EEAGGYCK----GYVVDISKKEEVYKAADVIRDE 160
            :...||..:|                     ||....|.    .|..|:.|:|.||..|:.:|.|
  Rat    71 QSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPPCNLQVFTYTCDVGKRENVYLTAERVRKE 135

  Fly   161 VGDITLLINNAGVVSGLHLLDTPDHLIERSFNVNVMAHFWTTKAFLPKMIENDRGHIATIASLAG 225
            ||::::|:||||||||.|||:.||.||||:..||..|||||||||||.|:|.:.|||.|:||..|
  Rat   136 VGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLG 200

  Fly   226 HVGISKLVDYCASKFAAVGFDEALRLELEVLGHTNIRTTCICPFFIQATGMFDDVNAR-----WV 285
            ....:.:.|||||||..|||.|:|..||:......|:||.:||:.:. ||||.....|     ::
  Rat   201 LFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVD-TGMFRGCRIRKEIEPFL 264

  Fly   286 PTLNPNDVADRVIAAIRKNEKLAVIPGFLKVLLSFKWTFPWGCV 329
            |.|.|:....:.:.||..::.:...|..:.::...|...|:..|
  Rat   265 PPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9265NP_001260655.1 fabG 82..299 CDD:235546 101/246 (41%)
17beta-HSDXI-like_SDR_c 88..328 CDD:187598 105/269 (39%)
Rdh10NP_852143.1 17beta-HSDXI-like_SDR_c 38..307 CDD:187598 105/269 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24322
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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