DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and itgb8

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:XP_073787461.1 Gene:itgb8 / 556752 ZFINID:ZDB-GENE-071213-3 Length:779 Species:Danio rerio


Alignment Length:812 Identity:226/812 - (27%)
Similarity:356/812 - (43%) Gaps:140/812 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RAFLWIYLVFLIAEISHSDADSIDDQCRHA--DSCERCLSAHLECAWCTDKEY----QVGYRCLS 65
            |..|.:..|.|:...|    :|.|::|..|  .:||.||....|||||:.:.:    .|..||.|
Zfish    15 RMLLLLISVLLLLVRS----NSADNRCLSALISTCEDCLRRGPECAWCSQERFLDGAHVSQRCGS 75

  Fly    66 RRQLLNYNCSETDIYENQPVLDVLQDKPLKDYETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTA 130
            ...|....|.| :..|| |.:.|       :...:..:.||.|:...:.|..|:.....:..:..
Zfish    76 VSDLRVRGCEE-EFIEN-PKVKV-------EVNATISSSQVAPREITIHLRPGSEASFVIEVQQL 131

  Fly   131 RNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMI--LPQHR 193
            ...|:|||.|:|::.:|:|:...|:.:|..||..:|..:.::|:|||||.|||..|.|  .|...
Zfish   132 ERYPVDLYYLVDVSASMQDNLDRLKTVGLALSHQMKQHSSDFRVGFGSFVDKPVSPYIDVHPSKL 196

  Fly   194 ENPCAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGW 258
            .|||:.....|.|.:|:.|.|.:|.::..||..:...:|:||:|..|||.||::|..||.|:|||
Zfish   197 LNPCSEYEVHCRPAHGFIHVLPVTQNMSEFTRVIQEQRISGNMDTPEGGFDAMLQATVCQKDIGW 261

  Fly   259 KEQARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRK 323
            :.:|:.:::::||...|||.|..||||:..:|.:||| :...|:.:...::|::.::..:||...
Zfish   262 RPEAKHLLLVMTDQPSHLALDSKLAGIVVPHDGRCHL-EDNVYSQTSTMEHPTVAQLAEKLLENS 325

  Fly   324 INVIFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIK--RTQFADNSPDFI 386
            |..||||.......|.:|..|:.. |||..|...:||:.:|:.::|:.|:.  ..|.....|...
Zfish   326 IYSIFAVDHLQYQWYEDLVDLIPG-SYVGRLFPKASNLKDLVVQAYKKLLSDVEVQMELQDPQQA 389

  Fly   387 DMAYYTDCGGQFP---SLQKRNYCNNVTLGKQIDFYVDVTLKKYPDNQVYTHKIRVEETSLSEFM 448
            : .::.:.....|   |....:.|:.|...:.:.|.:.|.:...|....                
Zfish   390 E-RFWVNVSAICPGGSSAAGNSKCSGVQPKQTVFFQLTVGMLSCPAGSA---------------- 437

  Fly   449 DLDV-ELQRPCPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCP-TDATNVTSNEA 511
            |.|| .|.||....|:   .....|.||                  |:.|..| .:.::.|:|.:
Zfish   438 DQDVLMLVRPVGFNES---VRVRIRQLC------------------GSGCTDPKPEPSSCTTNAS 481

  Fly   512 LLQKCRQPFSDKSTSELVCSNHGDCDCGTCLCDP----GYTGPFCECRECLDC--DEKL-----A 565
              ..||:   .::|.  |||:.|.|.||||:||.    ...|.|||..: ..|  |..|     .
Zfish   482 --DSCRE---HRNTP--VCSSRGVCRCGTCVCDSSRFGNIYGKFCEMDD-FSCPYDGGLVCGGHG 538

  Fly   566 DCFCGQCVCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEP-YLGKFCEIDPEKD 629
            .|..|:|||..||:|..|.|...||:||...|.||.:||.|.|.:|.|::| ..|.|||..| ..
Zfish   539 RCVRGECVCFSGWTGEACACRESTDSCVSDDGFICGDRGRCVCGKCVCDDPRRSGAFCEKCP-MC 602

  Fly   630 NKLCLFYEPCVTCLIEQKQGMGVCENLTEICSSLDRQETYPYNFVHE----------LDPEQDQC 684
            :..|..:..||.|.:....|....:...:.||.|       .::|.:          |.|..|:|
Zfish   603 HSSCQSHWNCVNCHLSNGLGSDGFQLCNQSCSPL-------VDYVDDITELVRGKYCLYPSTDKC 660

  Fly   685 LVRL------------VNKHGIQCDSFFVYQVIDHSNFLTIQAVDCEPPDYVALVGYISAFTLLI 737
            ..|.            :::|.: |       |.....|.|..:|            ::...||.|
Zfish   661 QYRFLMELASDGAQLHISRHPV-C-------VWSRRYFKTFLSV------------FLLTVTLGI 705

  Fly   738 GLLIIFIILWYIRAKD--AREYAKFEEDQKNS 767
            |:|.....|..:..:.  ::...:||...|:|
Zfish   706 GMLAGVRQLLRVTGRSCISKTEPQFEHTHKDS 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 128/433 (30%)
EGF_2 529..552 CDD:400365 12/26 (46%)
Integrin_b_cyt 752..785 CDD:462580 4/18 (22%)
itgb8XP_073787461.1 None

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