DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and ITGB8

DIOPT Version :9

Sequence 1:NP_001303333.1 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_002205.1 Gene:ITGB8 / 3696 HGNCID:6163 Length:769 Species:Homo sapiens


Alignment Length:830 Identity:237/830 - (28%)
Similarity:363/830 - (43%) Gaps:137/830 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GGRAFLWIYLVF-LIAEISHSDADSIDDQC--RHADSCERCLSAHLECAWCTDKEYQVG----YR 62
            |..:|||...|| |:..:...:    |::|  .:|.||.|||:...||.||..:::..|    .|
Human    22 GPASFLWAAWVFSLVLGLGQGE----DNRCASSNAASCARCLALGPECGWCVQEDFISGGSRSER 82

  Fly    63 CLSRRQLLNYNCSETDIYENQPVLDVLQDKPLKDYETSDQA-VQVTPQRAYLKLVKGNTQRMKLS 126
            |.....|::..||...|  ..|.:.|:       ..|.::. .||||....::|..|......|.
Human    83 CDIVSNLISKGCSVDSI--EYPSVHVI-------IPTENEINTQVTPGEVSIQLRPGAEANFMLK 138

  Fly   127 YRTARNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMIL-- 189
            ....:..|:|||.|:|::.:|.::.:.|..:|..||:.:...:.::||||||:.||...|.|.  
Human   139 VHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIH 203

  Fly   190 PQHRENPCAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTK 254
            |:...|.|:.....|.|.:||.|.||||::|..|..||...||:||:|..|||.||::|..||..
Human   204 PERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCES 268

  Fly   255 EIGWKEQARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYREL 319
            .|||:::|:::::::||...|||.|..||||:..||..||| |...|..|...::|||.::..:|
Human   269 HIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHL-KNNVYVKSTTMEHPSLGQLSEKL 332

  Fly   320 LRRKINVIFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQF-ADNSP 383
            :...|||||||..:....|.:|..|:.. :....:.:.::|:..|:.::|:.||...:. .:|..
Human   333 IDNNINVIFAVQGKQFHWYKDLLPLLPG-TIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQV 396

  Fly   384 DFIDMAYYTDC--GGQFPSLQKRNYCNNVTLGKQIDFYVDVTLKKYP----DNQVYTHKIRVEET 442
            ..|.......|  |.:.|.::.   |.|||...::.|.|.||:||..    .|......|...||
Human   397 QGIYFNITAICPDGSRKPGMEG---CRNVTSNDEVLFNVTVTMKKCDVTGGKNYAIIKPIGFNET 458

  Fly   443 SLSEFMDLDVELQRPCPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCPTDATNVT 507
            :       .:.:.|.|.|| ..|....:|:  |..:.:|.....:|||.      .|..|....:
Human   459 A-------KIHIHRNCSCQ-CEDNRGPKGK--CVDETFLDSKCFQCDEN------KCHFDEDQFS 507

  Fly   508 SNEALLQKCR----QPFSDKSTSELVCSNHGDCDCGTCLCDP----GYTGPFCECRECLDCD--- 561
            |     :.|:    ||         |||..|.|.||.|.|..    ...|.:|| ::...|.   
Human   508 S-----ESCKSHKDQP---------VCSGRGVCVCGKCSCHKIKLGKVYGKYCE-KDDFSCPYHH 557

  Fly   562 ----EKLADCFCGQCVCKYGWSGSKCNC-DGDTDACVGPTGEICSERGTCQCEECQCEEP-YLGK 620
                ....:|..|:|.|..||.|.:|.| ......||...|::||.||||.|..|:|.:| .:|:
Human   558 GNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGR 622

  Fly   621 FCEIDPEKDNKLCLFYEPCVTCLIEQKQGMGVCENLTEICSSLDRQETYPYNFVHELDPEQDQCL 685
            ||              |.|.||....|:.....:.|            :|:|....:   .|||.
Human   623 FC--------------EHCPTCYTACKENWNCMQCL------------HPHNLSQAI---LDQCK 658

  Fly   686 VRLVNKHGIQCDSFFVYQVIDHSNFLTIQAVDC-EPPDYVALVGYISAFTLLIGLLIIFIILWYI 749
            .        .|........:|       |..:| ..|.|:.:...|...|.|||||.:.||...|
Human   659 T--------SCALMEQQHYVD-------QTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQVI 708

  Fly   750 ------RAKDAREYAKFEEDQKNSVRQENPIYRDPVGRYEVPKALSVKYD 793
                  :.|.:.:| :....:|:.:..::...|....|.|.|:  .:|.|
Human   709 LQWNSNKIKSSSDY-RVSASKKDKLILQSVCTRAVTYRREKPE--EIKMD 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_001303333.1 INB 38..460 CDD:197563 138/435 (32%)
EGF_2 524..552 CDD:285248 10/31 (32%)
Integrin_b_cyt 748..785 CDD:285884 7/42 (17%)
ITGB8NP_002205.1 INB 54..469 CDD:197563 138/435 (32%)
Cysteine-rich tandem repeats 471..629 53/194 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159898
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1226
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223415at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.850

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