DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and ITGB5

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_002204.2 Gene:ITGB5 / 3693 HGNCID:6160 Length:799 Species:Homo sapiens


Alignment Length:784 Identity:254/784 - (32%)
Similarity:384/784 - (48%) Gaps:68/784 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ADSCERCLSAHLECAWCTDKEY----QVGYRCLSRRQLLNYNCSETDIYENQPVLDVLQDKPLKD 96
            |.|||.||..|.:||||:.:::    .:..||..|..|:...|. .:|........||:..||..
Human    33 ATSCEECLLIHPKCAWCSKEDFGSPRSITSRCDLRANLVKNGCG-GEIESPASSFHVLRSLPLSS 96

  Fly    97 YETSD---QAVQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEELG 158
            ..:..   ..:|:|||...:.|..|:....:|..|...:.|:|||.||||:.:|:||...:..||
Human    97 KGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLG 161

  Fly   159 AQLSQTLKNLTGNYRLGFGSFADKPTLPM--ILPQHRENPCAAER--ATCEPTYGYRHQLSLTDD 219
            .:|::.::.||.|:|||||||.||...|.  ..|:::.|||...:  ..|.|::|:||.|.|||.
Human   162 TKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDR 226

  Fly   220 IPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQARKVVILVTDGFMHLAGDGLLAG 284
            :.:|...|...:::.|.|..|||.||::|..||.::|||::.|..:::..||...|:|.||.|.|
Human   227 VDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGG 291

  Fly   285 IIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIFAVTEEVVSSYWELSALMKEIS 349
            ::|.:|.|||||:|.|||.|...|||||..:..:|....||:|||||:.....|...:||:...:
Human   292 LVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTT 356

  Fly   350 YVDILSADSSNILELIKKSYESLIKRTQFAD-NSPDFIDMAYYTDC--GGQFPSLQKRNYCNNVT 411
             |:||..||.||::||..:|.|:..:.:.:. :.|:.:::.:...|  |..:|..:|   |..:.
Human   357 -VEILDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRK---CEGLK 417

  Fly   412 LGKQIDFYVDVTLKKYPDNQVYTHKIRVEETSLSEFMDLDVELQRPCPCQETPDPENEEGRFLCD 476
            :|....|.|.:..:..|.... .|...:......:.:::.|.....|.|....:|.:..    |:
Human   418 IGDTASFEVSLEARSCPSRHT-EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSAR----CN 477

  Fly   477 YKGYLYCGMCECDEGWTGTYCNCPTDATNVTSNEALLQK-CRQPFSDKSTSELVCSNHGDCDCGT 540
            ..|...||:|||..|:.||.|.|...     .|:::.|. ||:     :..:.:||..|||.|..
Human   478 GSGTYVCGLCECSPGYLGTRCECQDG-----ENQSVYQNLCRE-----AEGKPLCSGRGDCSCNQ 532

  Fly   541 CLCDPG----YTGPFCECRECLDCDEKL-------ADCFCGQCVCKYGWSGSKCNCDGDTDACVG 594
            |.|...    ..|||||| :...|....       .:|.||:|.|..|:.|..|||..|...|.|
Human   533 CSCFESEFGKIYGPFCEC-DNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRG 596

  Fly   595 PTGEICSERGTCQCEECQCEEP-YLGKFCEIDPEKDNKLCLFYEPCVTCLIEQKQGMGVCENLTE 658
            ..|:||||||.|.|.:|||.|| ..|:.||..|...: .|.....||.||:...   |..:|.| 
Human   597 RDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPD-ACSTKRDCVECLLLHS---GKPDNQT- 656

  Fly   659 ICSSLDRQE--TYPYNFVHELDPEQDQCLVRLVNKHGIQCDSFFVYQVI--DHSNFLTIQAVDC- 718
             |.||.|.|  |:....|     :.||..|....|....|...|.|..:  ..||...::..:| 
Human   657 -CHSLCRDEVITWVDTIV-----KDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECG 715

  Fly   719 EPPDYVALVGYISAFTLLIGLLIIFIILWYIRAKDAREYAKFEEDQKNSVRQE---NPIYRDPVG 780
            ..|:.:.::..:....||:||.::.|....:...|.||:||| :.:::..|.|   ||:||.|:.
Human   716 NTPNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKF-QSERSRARYEMASNPLYRKPIS 779

  Fly   781 RYEV 784
            .:.|
Human   780 THTV 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 144/435 (33%)
EGF_2 529..552 CDD:400365 10/26 (38%)
Integrin_b_cyt 752..785 CDD:462580 14/36 (39%)
ITGB5NP_002204.2 INB 35..463 CDD:197563 143/433 (33%)
I-EGF_1 465..493 CDD:465729 9/31 (29%)
Integrin_B_tail 635..714 CDD:462325 24/88 (27%)
Integrin_b_cyt 746..781 CDD:462580 13/35 (37%)

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