DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and Itgb8

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_796264.2 Gene:Itgb8 / 320910 MGIID:1338035 Length:767 Species:Mus musculus


Alignment Length:822 Identity:230/822 - (27%)
Similarity:358/822 - (43%) Gaps:138/822 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WIY-LVFLIAEISHSDADSIDDQCRHAD--SCERCLSAHLECAWCTDKEYQVG----YRCLSRRQ 68
            |:: ||..:.:..|       ::|..|:  ||.|||....||.||..:::..|    .||.:...
Mouse    31 WVFSLVLGLGQSEH-------NRCGSANVVSCARCLQLGPECGWCVQEDFVSGGSGSERCDTVSS 88

  Fly    69 LLNYNCSETDIYENQPVLDVLQDKPLKDYETSDQAV--QVTPQRAYLKLVKGNTQRMKLSYRTAR 131
            |::..|         || |.::...:....:|:..:  ||||....::|..|......|..|..:
Mouse    89 LISKGC---------PV-DSIEYLSVHVVTSSENEINTQVTPGEVSVQLHPGAEANFMLKVRPLK 143

  Fly   132 NNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMIL--PQHRE 194
            ..|:|||.|:|::.:|.::.:.|..:|..||:.:...:.::||||||:.||...|.|.  |:...
Mouse   144 KYPVDLYYLVDVSASMHNNIEKLNSVGNDLSKKMALYSRDFRLGFGSYVDKTVSPYISIHPERIH 208

  Fly   195 NPCAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWK 259
            |.|:.....|.|.:||.|.||||::|..|..||...||:||:|..|||.||::|..||...|||:
Mouse   209 NQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIGWR 273

  Fly   260 EQARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKI 324
            ::|:::::::||...|||.|..||||:..||..||| |...|..|...::|||.::..:|:...|
Mouse   274 KEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHL-KNNVYVKSTTMEHPSLGQLSEKLIDNNI 337

  Fly   325 NVIFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQF-ADNSPDFIDM 388
            ||||||..:....|.:|..|:.. :....:.:.::|:..|:.::|:.:|...:. .:|....:..
Mouse   338 NVIFAVQGKQFHWYKDLLPLLPG-AIAGEIESKAANLNNLVVEAYKKIISEVKVQLENQVHGVHF 401

  Fly   389 AYYTDC--GGQFPSLQKRNYCNNVTLGKQIDFYVDVTLKKYP----DNQVYTHKIRVEETSLSEF 447
            .....|  |.:.|.:   :.|.|||...::.|.|.|.:|...    .|......|...||:    
Mouse   402 NITAICPDGARKPGI---SGCGNVTSNDEVLFNVTVVMKTCDIMGGKNYAIIKPIGFNETT---- 459

  Fly   448 MDLDVELQRPCPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYC-NCPTDATNVTSNEA 511
               .|.:.|.|.||    .||..|     .||       :|.|......| .|.....:...::.
Mouse   460 ---KVHIHRSCSCQ----CENHRG-----LKG-------QCAEAAPDPKCPQCDDSRCHFDEDQF 505

  Fly   512 LLQKCRQPFSDKSTSELVCSNHGDCDCGTCLCDP----GYTGPFCECRECLDCDEKLAD------ 566
            ..:.|: |..|:.    |||..|.|.||.|||..    ...|.:|| ::...|.....|      
Mouse   506 PSETCK-PQEDQP----VCSGRGVCICGKCLCHKTKLGRVYGQYCE-KDDFSCPYLHGDVCAGHG 564

  Fly   567 -CFCGQCVCKYGWSGSKCNC-DGDTDACVGPTGEICSERGTCQCEECQCEEPYLGKFCEIDPEKD 629
             |..|:|.|..||.|.:|.| ......||...|::||.||||.|..|:|          .||...
Mouse   565 ECEGGRCQCFSGWEGDRCQCPSASAQHCVNSKGQVCSGRGTCVCGRCEC----------TDPRSI 619

  Fly   630 NKLCLFYEPCVTCLIEQKQGMGVCENLTEICSSLDRQETYPYNFVH-ELDPEQDQCLVRLVNKHG 693
            .:||   |.|.||.:...:.....:.|            :|:|... .||..:..|.|  :.:|.
Mouse   620 GRLC---EHCPTCHLSCSENWNCLQCL------------HPHNLSQAALDQCKSSCAV--MEQHR 667

  Fly   694 IQCDSFFVYQVIDHSNFLTIQAVDC-EPPDYVALVGYISAFTLLIGLLIIFIILWYI------RA 751
            :.                  |..:| ..|.|:.:...|...|.|||||.:.||...|      :.
Mouse   668 MD------------------QTSECLSGPSYLRIFFIIFIVTFLIGLLKVLIIRQVILQWNNNKI 714

  Fly   752 KDAREYAKFEEDQKNSVRQENPIYRDPVGRYEVPKALSVKYD 793
            |.:.:| :....:|:.:..::...|....|.|.|:  .:|.|
Mouse   715 KSSSDY-RMSASKKDKLILQSVCTRAVTYRREKPE--EIKMD 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 135/436 (31%)
EGF_2 529..552 CDD:400365 11/26 (42%)
Integrin_b_cyt 752..785 CDD:462580 6/32 (19%)
Itgb8NP_796264.2 INB 54..469 CDD:197563 135/436 (31%)

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