Sequence 1: | NP_001303333.1 | Gene: | Itgbn / 35368 | FlyBaseID: | FBgn0010395 | Length: | 799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038941223.1 | Gene: | Itgb4 / 25724 | RGDID: | 2928 | Length: | 1872 | Species: | Rattus norvegicus |
Alignment Length: | 788 | Identity: | 222/788 - (28%) |
---|---|---|---|
Similarity: | 364/788 - (46%) | Gaps: | 118/788 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 WIYLVFLIAEISHSDADSIDDQCRHAD--SCERCLSAHLECAWCTDKEYQVGYRCLSRRQLLNYN 73
Fly 74 CSETDIYENQPVLDVLQDKPLKDYETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLY 138
Fly 139 VLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPM--ILPQHRENPCAAER 201
Fly 202 ATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQARKVV 266
Fly 267 ILVTDGFMHLAGDG--LLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIFA 329
Fly 330 VTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQF-ADNSPDFIDMAYYTD 393
Fly 394 CGGQFPSLQKRNYCNNVTLGKQIDFYVDVTLKKYPDNQVYTHKIRVE----------ETSLSEFM 448
Fly 449 DLDVE-LQRPCPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCPTDATNVTSNEAL 512
Fly 513 LQKCRQPFSDKSTSELVCSNHGDCDCGTCLC--DPGYTGPFCECR--EC-----LDCDEKLADCF 568
Fly 569 CGQCVCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEP---YLGKFCEIDPEKDN 630
Fly 631 -KLCLFYEPCVTCLIEQKQGMG-----VC----------------ENLTEICSSLDRQETYPYNF 673
Fly 674 VHELDPEQDQCLVRLVNKHGIQCDSFFVYQVIDHSNFLTIQAVDCEPPDYVALVGYISAFTLLIG 738
Fly 739 LLIIFIIL 746 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itgbn | NP_001303333.1 | INB | 38..460 | CDD:197563 | 128/437 (29%) |
EGF_2 | 524..552 | CDD:285248 | 11/29 (38%) | ||
Integrin_b_cyt | 748..785 | CDD:285884 | |||
Itgb4 | XP_038941223.1 | vWFA | 37..454 | CDD:412136 | 127/433 (29%) |
I-EGF_1 | 458..486 | CDD:408172 | 9/31 (29%) | ||
Integrin_B_tail | 628..711 | CDD:400356 | 20/108 (19%) | ||
Calx_beta | 992..1086 | CDD:197594 | |||
fn3 | 1130..1210 | CDD:394996 | |||
FN3 | 1222..1315 | CDD:238020 | |||
FN3 | 1577..1658 | CDD:238020 | |||
fn3 | 1691..1776 | CDD:394996 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353963 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D223415at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10082 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.950 |