Sequence 1: | NP_001303333.1 | Gene: | Itgbn / 35368 | FlyBaseID: | FBgn0010395 | Length: | 799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_037303.1 | Gene: | Itgb7 / 25713 | RGDID: | 2929 | Length: | 807 | Species: | Rattus norvegicus |
Alignment Length: | 831 | Identity: | 260/831 - (31%) |
---|---|---|---|
Similarity: | 387/831 - (46%) | Gaps: | 121/831 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LVFLI----------AEISHS-------DAD-SIDDQCRHADSCERCLSAHLECAWCTDKEYQV- 59
Fly 60 ----GYRCLSRRQLLNYNCSETDIYENQPVLDVLQDKPLKDYETSDQAVQVTPQRAYLKLVKGNT 120
Fly 121 QRMKLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTL 185
Fly 186 PMI--LPQHRENPCAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQ 248
Fly 249 VIVCTKEIGWKEQARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLE 313
Fly 314 EIYRELLRRKINVIFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQF 378
Fly 379 ADNS-PDFIDMAYYTDCGGQFPSL----QKRNYCNNVTLGKQIDFYVDVTLKK---YPDNQVYTH 435
Fly 436 KIRVEETSLSEFMDLDVELQRPCPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCP 500
Fly 501 TDATNVTSNEALLQKCRQPFSDKSTSELVCSNHGDCDCGTCLCDPGYTGPFCECRECLDCDEK-- 563
Fly 564 -----LADCFCGQCVCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEPYLGKFCE 623
Fly 624 IDPEKDNKL-----CLFYEPCVTCLIEQKQGMG-VCENLTEICSSLDRQETYPYNFVHELDPEQD 682
Fly 683 Q--CLVRLVNKHGIQCDSFFVYQ-----VI----------DHSNFLTIQAVDCEPPDYVALVGYI 730
Fly 731 SAFTLLIGLLIIFIILWYIRAKDAREYAKFEED--QKNSVRQENPIYRDPV 779 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itgbn | NP_001303333.1 | INB | 38..460 | CDD:197563 | 153/436 (35%) |
EGF_2 | 524..552 | CDD:285248 | 11/27 (41%) | ||
Integrin_b_cyt | 748..785 | CDD:285884 | 11/34 (32%) | ||
Itgb7 | NP_037303.1 | Integrin_beta | 50..477 | CDD:278776 | 153/436 (35%) |
VESA1_N | 538..>646 | CDD:289551 | 39/114 (34%) | ||
EGF_2 | 608..636 | CDD:285248 | 12/27 (44%) | ||
Integrin_B_tail | 646..717 | CDD:285239 | 18/85 (21%) | ||
Integrin_b_cyt | 750..791 | CDD:285884 | 11/33 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1226 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D223415at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100678 | |
Panther | 1 | 1.100 | - | - | O | PTHR10082 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.780 |