DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and Itgbl1

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_663442.2 Gene:Itgbl1 / 223272 MGIID:2443439 Length:494 Species:Mus musculus


Alignment Length:392 Identity:113/392 - (28%)
Similarity:150/392 - (38%) Gaps:109/392 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 CPCQ----ETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCPT--DATNVTSNEALLQKC 516
            |.|.    ||.|.:...|...||      ||.|:||.||:|..|..||  |.|...||    |.|
Mouse    89 CECHEWICETYDGKTCAGHGNCD------CGKCKCDVGWSGEACQYPTKCDLTKKISN----QMC 143

  Fly   517 RQPFSDKSTSELVCSNHGDCDCGTCLCD--PGY---TGPFCEC--RECLDCDEK------LADCF 568
                  |::.:::|||.|.|.||.|.||  .|:   .|.||||  |||:| ||.      ...|:
Mouse   144 ------KNSQDVICSNAGTCHCGRCKCDNSDGHGLIYGKFCECDDRECID-DETEEVCGGHGKCY 201

  Fly   569 CGQCVCKYGWSGSKC--NCD----GDTDACVGPTGEICSERGTCQCEECQCEE--------PYLG 619
            ||.|.|:.||.|.||  .||    .....|..|.|::||.||||.|.||.|.:        ...|
Mouse   202 CGNCYCEAGWHGDKCEFQCDITPWESKRRCTSPDGKVCSNRGTCVCGECSCHDVDPTGDWGDIHG 266

  Fly   620 KFCEIDPEKD---------NKLCLFYEPC-------------------VTCLIEQKQGMGVCENL 656
            ..||.| |:|         :..|..:..|                   ..|.:..::....|:..
Mouse   267 DTCECD-ERDCRAVYDRYSDDFCSGHGQCNCGRCDCRAGWYGKKCEHPRNCPLSAEESTKKCQGS 330

  Fly   657 TEI-CSSLDRQE-----TYP------YNFVHELDPEQDQCLVRLV-NKHGI------QCDSFFVY 702
            ::: ||...|.|     .||      |....|.|..:.:.|..:| ..||:      .|:..:..
Mouse   331 SDLPCSGRGRCECGRCTCYPPGDSRVYGKTCECDDRRCEDLDGVVCGGHGMCSCGRCVCEKGWFG 395

  Fly   703 QVIDH---SNFLTIQAVD-CEPPDYVALVGYISAFTLLIGLLIIFIILWYIRAK----DAREYAK 759
            ::..|   .|....|:.. ||..|.....|..|..   .|..|.....|||..:    |.|:..|
Mouse   396 KLCQHLRKCNMTEEQSRSLCESADGTLCSGKGSCH---CGKCICSGEEWYISGEFCDCDDRDCDK 457

  Fly   760 FE 761
            .:
Mouse   458 HD 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 1/1 (100%)
EGF_2 529..552 CDD:400365 12/27 (44%)
Integrin_b_cyt 752..785 CDD:462580 3/14 (21%)
Itgbl1NP_663442.2 Cysteine-rich tandem repeats 51..494 113/392 (29%)

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