DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and C05D9.3

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001360655.1 Gene:C05D9.3 / 182254 WormBaseID:WBGene00015472 Length:453 Species:Caenorhabditis elegans


Alignment Length:651 Identity:129/651 - (19%)
Similarity:191/651 - (29%) Gaps:293/651 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IYLVFLIAEISHSDADSIDDQCRHAD---SCERCLSAHLECAWCTDKEYQVGYRCLSRRQLLNYN 73
            |:.:.|:..::..  :|.|..|...|   ||.:|:.||.|||||.|....:..||..:.:..|..
 Worm     5 IFFITLLTIVAAQ--ESADQLCSSFDAQQSCGQCIKAHAECAWCIDPHSSLTNRCQLKSKFTNET 67

  Fly    74 CSETDIYENQPVLDVLQDKPLKDYETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLY 138
            |:...:|                          :||.|.:|:              .:|.||:  
 Worm    68 CTPHLVY--------------------------SPQTAQVKI--------------QQNLPLE-- 90

  Fly   139 VLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMILPQHRENPCAAERAT 203
                   |.:.|.||:.....|....                      .::|.|          :
 Worm    91 -------TKQHDGKTIVRQQPQAVSV----------------------RLMPSH----------S 116

  Fly   204 CEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQARKVVIL 268
            ...::.|.||                                                       
 Worm   117 ATVSFKYLHQ------------------------------------------------------- 126

  Fly   269 VTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIFAVTEE 333
             ||                                      ||                      
 Worm   127 -TD--------------------------------------PS---------------------- 130

  Fly   334 VVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQFADNSPDFIDMAYYTDCGGQF 398
                                            ::|.|......|.:|.....:.:.::..|.|: 
 Worm   131 --------------------------------RRSTEPETMEIQTSDVKDTPLQLKFFIVCDGE- 162

  Fly   399 PSLQKRNYCNNVTLGKQIDFYVDVTLKKYPDNQVYTHKIRVEETSLSEFMDLDVEL----QRP-- 457
              |::...|                  :..:||:...||.|...|.|...|:.:.:    ||.  
 Worm   163 --LKETKSC------------------RVQNNQIVEFKIEVLVNSCSSTGDITLSVGILRQRTIA 207

  Fly   458 ---------CPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCPTDATNVTSNEALL 513
                     |.|::.|:..:.    ||...|:|.||.|.||:...|..|.||..:..|:....|.
 Worm   208 GLYVTTICGCECEKHPEINSR----LCHQNGHLVCGQCVCDQSRGGDKCECPLASHGVSKASELE 268

  Fly   514 QKCRQPFSDKSTSELVCSNHGDCDCGTCLCD-PGYTGPFCEC--REC-LDCDEKLAD----CFCG 570
            .|||  |:..|.   |||..|.|.||.|.|: |..||.||:|  ..| |..:.|:..    |.||
 Worm   269 DKCR--FNSSSP---VCSASGKCKCGQCQCNKPTVTGKFCQCDNDSCPLAVNGKVCSGNGVCDCG 328

  Fly   571 QCVCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEPYLGKFCEID-----PEKDN 630
            .|.|:.||....|:|...::.|| ..||:||..|.|:|..|.|.....|.||..|     ||:.:
 Worm   329 VCKCEMGWERDDCSCSTASNNCV-DNGELCSNNGRCECNRCVCNMGKTGAFCGSDEKTPAPEEKD 392

  Fly   631 K 631
            |
 Worm   393 K 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 56/436 (13%)
EGF_2 529..552 CDD:400365 12/23 (52%)
Integrin_b_cyt 752..785 CDD:462580
C05D9.3NP_001360655.1 vWFA 32..>123 CDD:469594 30/171 (18%)
I-EGF_1 219..247 CDD:465729 11/31 (35%)
gliding_CglD <239..370 CDD:468178 52/136 (38%)
Blue background indicates that the domain is not in the aligned region.

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