DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and Itgb1

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_034708.1 Gene:Itgb1 / 16412 MGIID:96610 Length:798 Species:Mus musculus


Alignment Length:841 Identity:271/841 - (32%)
Similarity:408/841 - (48%) Gaps:119/841 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WIYLVFLIAEI-SHSDADSIDDQC--RHADSCERCLSAHLECAWCTDKEY-QVGY----RCLSRR 67
            ||.|:.||..: ..:|    .::|  .:|.||..|:.|...|.|||:..: |.|.    ||....
Mouse     8 WIGLISLICSVFGQTD----KNRCLKANAKSCGECIQAGPNCGWCTNTTFLQEGMPTSARCDDLE 68

  Fly    68 QLLNYNCSETD---------IYENQPVLDVLQDKPLKDYETSDQAVQVTPQRAYLKLVKGNTQRM 123
            .|....|..:|         |.:|:.|.:  :.|.:.:....:...|:.||:..|||..|..|:.
Mouse    69 ALKKKGCQPSDIENPRGSQTIKKNKNVTN--RSKGMAEKLRPEDITQIQPQQLLLKLRSGEPQKF 131

  Fly   124 KLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMI 188
            .|.::.|.:.|:|||.||||:::|:||.:.::.||..|...::.:|.::|:|||||.:|..:|.|
Mouse   132 TLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYI 196

  Fly   189 --LPQHRENPCAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIV 251
              .|....|||.:|: .|...:.|::.|||||....|...|...:|:||||:.|||.||:|||.|
Mouse   197 STTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTDRGEFFNELVGQQRISGNLDSPEGGFDAIMQVAV 260

  Fly   252 CTKEIGWKEQARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIY 316
            |...|||:...| :::..||...|.||||.|.||:..||.||||.. ..||.|..|||||:..:.
Mouse   261 CGSLIGWRNVTR-LLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NVYTMSHYYDYPSIAHLV 323

  Fly   317 RELLRRKINVIFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQFADN 381
            ::|....|..|||||||....|.||..|:.: |.|..||.:|||:::||..:|.||.... ..:|
Mouse   324 QKLSENNIQTIFAVTEEFQPVYKELKNLIPK-SAVGTLSGNSSNVIQLIIDAYNSLSSEV-ILEN 386

  Fly   382 S--PDFIDMAYYTDC-GGQFPSLQKRNYCNNVTLGKQIDFYVDVTLKKYPDNQVYTHKIRVEETS 443
            |  ||.:.:.|.:.| .|...:.:....|:|:::|.::.|.:.:|..|.|:.:..|  |:::...
Mouse   387 SKLPDGVTINYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITANKCPNKESET--IKIKPLG 449

  Fly   444 LSEFMDLDVELQRPCPCQE---TPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCPTDATN 505
            .:|.:::.::....|.||.   ...|:..||      .|...||.|.|:||..|.:|.|.||..|
Mouse   450 FTEEVEVVLQFICKCNCQSHGIPASPKCHEG------NGTFECGACRCNEGRVGRHCECSTDEVN 508

  Fly   506 VTSNEALLQKCRQPFSDKSTSELVCSNHGDCDCGTCLC------DPGYTGPFCECRECLDCDEK- 563
            ....:|.   ||     |..|..:|||:|:|.||.|:|      :..|:|.|||| :..:||.. 
Mouse   509 SEDMDAY---CR-----KENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCEC-DNFNCDRSN 564

  Fly   564 ------LADCFCGQCVCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEP-YLGKF 621
                  ...|.|..|.|...::||.|:|..||..|:...|:||:.||.|:|..|:|.:| :.|..
Mouse   565 GLICGGNGVCRCRVCECYPNYTGSACDCSLDTGPCLASNGQICNGRGICECGACKCTDPKFQGPT 629

  Fly   622 CEIDPEKDNKLCLFYEPCVTCLIEQKQGMGVCENLTEI--CSSLDR--------QETYPYNFVH- 675
            |              |.|.|||       |||....|.  |.:.::        ||...:|... 
Mouse   630 C--------------ETCQTCL-------GVCAEHKECVQCRAFNKGEKKDTCAQECSHFNLTKV 673

  Fly   676 ----------ELDPEQDQCLVRLVNKHGIQCDSFFVYQVIDHSNFL--TIQAVDCEP-PDYVALV 727
                      ::||     :.....|....|..:|.|.|..::..:  .::..||.. ||.:.:|
Mouse   674 ESREKLPQPVQVDP-----VTHCKEKDIDDCWFYFTYSVNGNNEAIVHVVETPDCPTGPDIIPIV 733

  Fly   728 GYISAFTLLIGLLIIFIILWYIRAKDAREYAKFEEDQKNSV--RQENPIYRDPVGRYEVPK 786
            ..:.|..:||||.::.|....:...|.||:||||:::.|:.  ..|||||:..|.....||
Mouse   734 AGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPK 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 153/440 (35%)
EGF_2 529..552 CDD:400365 11/28 (39%)
Integrin_b_cyt 752..785 CDD:462580 14/34 (41%)
Itgb1NP_034708.1 INB 34..464 CDD:197563 152/438 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..104 5/29 (17%)
CX3CL1-binding. /evidence=ECO:0000250|UniProtKB:P05556 207..213 2/6 (33%)
CX3CL1-binding. /evidence=ECO:0000250|UniProtKB:P05556 295..314 9/19 (47%)
Interaction with TMEM182. /evidence=ECO:0000250|UniProtKB:P07228 383..465 17/83 (20%)
I-EGF_1 466..495 CDD:465729 11/34 (32%)
Integrin_B_tail 640..727 CDD:462325 15/91 (16%)
Integrin_b_cyt 755..795 CDD:462580 16/40 (40%)
Signal for sorting from recycling endosomes, interaction with ACAP1. /evidence=ECO:0000250 762..767 3/4 (75%)
Interaction with ITGB1BP1. /evidence=ECO:0000250 785..792 1/6 (17%)

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