DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgbn and itgb8

DIOPT Version :10

Sequence 1:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster
Sequence 2:XP_002933344.3 Gene:itgb8 / 100494899 XenbaseID:XB-GENE-950732 Length:808 Species:Xenopus tropicalis


Alignment Length:819 Identity:223/819 - (27%)
Similarity:342/819 - (41%) Gaps:164/819 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RAFLWIY----LVFLIAEISHSDADSIDDQC--RHADSCERCLSAHLECAWCTDKEYQV----GY 61
            |.|:.|.    |:||:..:    ..|::::|  ..|.:|.:||:...||.|||.:::.:    ..
 Frog    69 RCFMSILRAFGLLFLLLGL----CQSVENRCSSSSATTCAKCLALGPECGWCTQEDFMMDSTENE 129

  Fly    62 RCLSRRQLLNYNCSETDIYENQPVLDVLQDKPLKDYETSDQAVQVTPQRAYLKLVKGNTQRMKLS 126
            ||.:...|.:..|.:..|  ..|....   :||...:|:.   ||||....:.:..|......|.
 Frog   130 RCDTALNLKSKGCRQDSI--EYPTAHA---QPLSSRDTNS---QVTPAEVSVHIRPGAKVNFMLK 186

  Fly   127 YRTARNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMIL-- 189
            ....|..|||:|.|:|::.:|......|..:|..|||.:.|.:.:.:.|||||.|||..|.|.  
 Frog   187 VHHLRKYPLDIYYLVDISASMHKSIARLNSVGFDLSQKMANFSDDIKYGFGSFVDKPVSPYISVH 251

  Fly   190 PQHRENPCAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTK 254
            ||..:|.|:.....|.|.:||.:.|.||.:...|.:.|...:|.||:||.||..:|::|..||..
 Frog   252 PQKIKNQCSVVDLVCMPPHGYINVLPLTYNTTKFKNVVGKQRIAGNIDNPEGAFEAMLQAAVCNT 316

  Fly   255 EIGWKEQARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYREL 319
            :|||:::||.::||:||...|||.|..||||:..||..||| |...|..|.:.:||||..:..:|
 Frog   317 DIGWRKEARHLLILMTDQTSHLALDSKLAGIVTPNDGSCHL-KDNVYIRSSDMEYPSLGLLGEKL 380

  Fly   320 LRRKINVIFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQF-ADNSP 383
            ....|:.:|||.....:.|.:|..|:...: ...|...:||:..|:..:|:.|:...:. .||..
 Frog   381 TENHISGVFAVQGPQFNWYKDLLPLIPGTT-ARQLDPFASNMKNLVFDAYKMLLSEVKIEVDNPI 444

  Fly   384 DFIDMAYYTDCGGQFPSLQKRN---YCNNVTLGKQIDFYVDVTL--------KKYPDNQVYTHKI 437
            ..|.:.....|    |...:|:   .|.||...:::.|.|.:|:        :.|    :....:
 Frog   445 KGIHVHVTAIC----PDGTRRSGKEGCQNVKANEKVFFNVTLTMDSCDVHNGRDY----IVLRPL 501

  Fly   438 RVEETSLSEFMDLDVELQRPCPCQETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCN---C 499
            ...||::       :::.|.|.||             |:...... |.|..|:   .|.|.   |
 Frog   502 GFNETAI-------IKVHRDCTCQ-------------CNSVSQAK-GKCVTDD---STDCQTTPC 542

  Fly   500 PTDATNVTSNEALLQKCRQPFSDKSTSELVCSNHGDCDCGTCLCDP----GYTGPFCECRECLDC 560
            ..:..:....::..:.||     .|.|:.|||..|.|.||.|.|..    ...|.:|| ::...|
 Frog   543 KEEICSSDELDSASESCR-----ASPSQPVCSGRGVCLCGKCFCQKTKLGAIYGKYCE-KDTFSC 601

  Fly   561 ---DEKL----ADCFCGQCVCKYGWSGSKCNCDGD-TDACVGPTGEICSERGTCQCEECQCEEPY 617
               ..||    .||..|:|.|..||...:|:|... ...|:...|.:||.||.|||.:|:|    
 Frog   602 PYHHGKLCSGNGDCEDGKCRCFNGWESDRCHCASSLRKHCMNSKGLVCSGRGVCQCGKCEC---- 662

  Fly   618 LGKFCEIDPEKDNKLCLFYEPCVTCLIEQKQGMGVCENLTEICSSLDRQETYPYNFVHELDPEQD 682
                  .|.:....||.:......|  |..||..   |::|                    ||. 
 Frog   663 ------TDAKSFGPLCQYCTDNWNC--EHFQGSA---NVSE--------------------PEG- 695

  Fly   683 QCLVRLVNKHGIQCDSFFVYQVIDHSNFLTIQAVDC-EPPDYVALVGYISAFTLLIGLLIIF--- 743
                   |.:...| :..|| .||       |..:| ..|..:.|...||..|.|:|:|.:.   
 Frog   696 -------NLYETAC-ALLVY-YID-------QTSECFSDPRILTLFFIISIVTFLLGILTVLLTR 744

  Fly   744 -IILWYIRAKDAREYAKFEEDQKNSVRQENPIYRDPVGR 781
             |||.:.:.:|                :..|.||.|..:
 Frog   745 HIILHHHKTRD----------------RSTPSYRTPTNK 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgbnNP_523608.2 INB 38..460 CDD:197563 131/439 (30%)
EGF_2 529..552 CDD:400365 10/26 (38%)
Integrin_b_cyt 752..785 CDD:462580 5/30 (17%)
itgb8XP_002933344.3 vWFA 102..517 CDD:469594 131/439 (30%)

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