Sequence 1: | NP_001303333.1 | Gene: | Itgbn / 35368 | FlyBaseID: | FBgn0010395 | Length: | 799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001090775.1 | Gene: | itgb6 / 100037861 | XenbaseID: | XB-GENE-960432 | Length: | 696 | Species: | Xenopus tropicalis |
Alignment Length: | 726 | Identity: | 241/726 - (33%) |
---|---|---|---|
Similarity: | 356/726 - (49%) | Gaps: | 87/726 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 IYLVFLIAEISHSDADSIDDQCRHAD--SCERCLSAHLECAWCTDKEY----QVGYRCLSRRQLL 70
Fly 71 NYNCSETDIYENQPVLDVLQDKPLKD--YETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTARNN 133
Fly 134 PLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMI--LPQHRENP 196
Fly 197 CAAERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQ 261
Fly 262 ARKVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINV 326
Fly 327 IFAVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQFADNSPDFIDMAYY 391
Fly 392 TDCGG---QFPSLQKRN-------YCNNVTLGKQIDFYVDVTLKKYPDNQVYTHKIRVEETSLSE 446
Fly 447 FMDLDVELQRPCPCQ---ETPDPENEEGRFLCDYKGYLYCGMCECDEGWTGTYCNCPTDATNVTS 508
Fly 509 NEALLQKCRQPFSDKSTSELVCSNHGDCDCGTCLCDPG----YTGPFCECRE--CLD-----CDE 562
Fly 563 KLADCFCGQCVCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEPYL-GKFCEIDP 626
Fly 627 EKDNKLCLFYEPCVTC-LIEQKQGMGVCENLTEICSSLDRQETYPYNFVHELD-----PEQDQCL 685
Fly 686 VRL---VNKHG 693 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itgbn | NP_001303333.1 | INB | 38..460 | CDD:197563 | 156/439 (36%) |
EGF_2 | 524..552 | CDD:285248 | 9/31 (29%) | ||
Integrin_b_cyt | 748..785 | CDD:285884 | |||
itgb6 | NP_001090775.1 | Integrin_beta | 30..454 | CDD:278776 | 156/439 (36%) |
Integrin_B_tail | 619..695 | CDD:285239 | 14/70 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D223415at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10082 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.110 |