DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9270 and ABCC12

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_001319111.1 Gene:ABCC12 / 839921 AraportID:AT1G30410 Length:1498 Species:Arabidopsis thaliana


Alignment Length:1322 Identity:474/1322 - (35%)
Similarity:736/1322 - (55%) Gaps:103/1322 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PRESAGIFSTLMFCFALPILFKGRKKTLEPTDLYNALKEHKAETLGDKFFATWQSEVRSCGDSPK 74
            |...|.|||.:.|.:..|::..|.:|.:...|::...|..:.|||..:|...|..|.|      :
plant   228 PERHASIFSRIYFGWITPLMQLGYRKPITEKDVWQLDKWDQTETLIKRFQRCWTEESR------R 286

  Fly    75 KEPSIIRVILKVFGWQLFLSGIVVGVLELG---TRATLPLILGALIAEFTRNGNGDGLW-AQIYG 135
            .:|.::|.:....|.:.:|:|| ..|..:|   ::...|:||..|:....   .||..| ..:|.
plant   287 PKPWLLRALNNSLGGRFWLAGI-FKVTRIGNDLSQFVGPVILSHLLRSMQ---EGDPAWVGYVYA 347

  Fly   136 LTLILSILFSVLMFHPLMMGLMHLAMKMRVAVSTAIYRKALRLSRTALGDTTTGQVVNLISNDLG 200
            ..:.:.:...||........:..:..::|..:..||:.|:|||:..|..:..:|:|.|:|:.|..
plant   348 FIIFVGVTLGVLCEAQYFQNVWRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDAN 412

  Fly   201 RFDRALIHFHFLWLGPLELLISSYFLYQQIGVASLYGIVILLLFLPIQTFLSRLTSRLRHQTALR 265
            ...:.....|.||..|..:::|...||||:|||||:|.:||.|.:|:||.:.....:|..:....
plant   413 ALQQISQQLHGLWSAPFRIIVSMILLYQQLGVASLFGSLILFLLIPLQTLIISKMRKLTKEGLQW 477

  Fly   266 TDQRVRMMNEIISGIQVIKMYTWEKPFGRLIERLRRSEMSSIRKVNYIRGTLLSF--EITLSRIA 328
            ||:||.:.|||:|.:..:|.|.|||.|...|:.:|..|:|..||..     |||.  ...|:.|.
plant   478 TDKRVGITNEILSSMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQ-----LLSAFNSFILNSIP 537

  Fly   329 IFVSLLG---FVLMGGELTAERAFSVTAFYNILRRTVCKFFPSGMSQFAEMMVTLRRIKGFMMRS 390
            :.|:::.   |||:||:||..|||:..:.:.:||..: ...|:.:||.....|:|:||:..:: |
plant   538 VVVTVVSFGVFVLLGGDLTPARAFTSLSLFAVLRFPL-NMLPNLLSQVVNANVSLQRIEELLL-S 600

  Fly   391 ETEALYLKGGQTNKLFEGEPLVKLQSFQARWNHDHVEPVLENINISLSPPQLVAVIGPVGSGKSS 455
            |...|    .|...|..|.|.:.:::....|:....:|.|.:||:.:....|||::|..|.||:|
plant   601 EERIL----AQNPPLQPGTPAISIKNGYFSWDSKTTKPTLSDINLEIPVGTLVAIVGGTGEGKTS 661

  Fly   456 LIQAILGELP-GESGKLKVQGDISYASQEPWLFNASVRDNILFGLPMDKHRYRNVIRNCALERDF 519
            ||.|:||||. .|:..:.::|.::|..|..|:|||:||:|||||...:..||...|...||:.|.
plant   662 LISAMLGELSHAETTSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDATALQHDL 726

  Fly   520 ELLHG-DRTFVGERGASLSGGQRARISLARAVYRQADTYLLDDPLSAVDTHVGRHLFEECMRGFL 583
            :||.| |.|.:||||.::||||:.|:|:|||||..:|.|:.||||||:|.||...:|:.||:..|
plant   727 DLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVAHQVFDSCMKDEL 791

  Fly   584 RDKLVILVTHQLQFLEHADLIVIMDKGKISAVGTYEEMLKSG-------QDFGKLLATEAQEMGD 641
            |.|..:|||:||.||...|.|:::.:|.|...||:.|:.|||       ::.||:.||:.....|
plant   792 RGKTRVLVTNQLHFLPLMDKIILVSEGMIKEEGTFVELSKSGILFKKLMENAGKMDATQEVNTND 856

  Fly   642 SN----QEQVNAEGDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPAQESRSQGKIGLG 702
            .|    ...|..:...||..||  :|..|...|.:                 .||.|..|.|...
plant   857 ENILKLGPTVTVDVSERNLGST--KQGKRRRSVLI-----------------KQEERETGIISWN 902

  Fly   703 IYGKYFSAGSG-WLMVILVAFFCLGTQILASGGDYFLSYWVKNNDSSS-STDIYIFSGINAALVI 765
            :..:|..|..| |:::||:|.: |.|::|......:||.|...:.|.: |...||        |:
plant   903 VLMRYKEAVGGLWVVMILLACY-LATEVLRVSSSTWLSIWTDQSTSKNYSPGFYI--------VV 958

  Fly   766 FALL----------RTLLFFSMAMHSSTQLHNTMFQGVSRTALYFFHANPSGRILNRFAMDLGQV 820
            :|||          .:....:.::|::.:||:.|...:.|..:.|||.||:||::|||:.|:|.:
plant   959 YALLGFGQVAVTFTNSFWLITSSLHAARRLHDAMLSSILRAPMLFFHTNPTGRVINRFSKDIGDI 1023

  Fly   821 DEILPAVM---LDCIQIFLTISGIIGVLCITNPWYLINTITMFLAFHFLRTFYLSTSRDLKRLEA 882
            |..:..:|   ::.:...|:...:||.:...:.|.::..:.:|.|.:.   :|.||||:::||::
plant  1024 DRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYL---YYQSTSREVRRLDS 1085

  Fly   883 IARSPMYSHFSATLNGLSTIRAMEAQDLLTKEYDNYQDIHSSGYYTFLST--NRAFGYYLD-LFC 944
            :.|||:|:.|...|||||:|||.:|.|.:.|  .|.:.:.::..:|..:|  ||.....|: |..
plant  1086 VTRSPIYAQFGEALNGLSSIRAYKAYDRMAK--INGKSMDNNIRFTLANTSSNRWLTIRLETLGG 1148

  Fly   945 VAYVISVTLMSYFNPPVDN----PGQIGLVITQAMSMTGTVQWGMRQSAELENSMTSVERVLEYR 1005
            |...::.|.....|...:|    ...:||:::..:::|..:...:||::..|||:.|||||..|.
plant  1149 VMIWLTATFAVLQNGNTNNQAGFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNSVERVGNYI 1213

  Fly  1006 HLEAEGEFESPDDKKPPMNWPQEGLISAEQLSLRYNPDPKADRVLKSLNFIIMPREKIGIVGRTG 1070
            .|.:|.. :..::.:|...||..|.|..|.:.|||.|.  ...||..|.|.:.|.||:|:|||||
plant  1214 DLPSEAT-DIIENNRPVCGWPSGGSIKFEDVHLRYRPG--LPPVLHGLTFFVSPSEKVGVVGRTG 1275

  Fly  1071 AGKSSLINALFRL-SYNEGSLVIDNTDILGIGLHDLRSKISIIPQEPVLFSGTLRCNLDPFEQYA 1134
            |||||::|||||: ...:|.::||:.|:...||.|:|..:|||||.|||||||:|.|:|||.::.
plant  1276 AGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRRVLSIIPQSPVLFSGTVRFNIDPFSEHN 1340

  Fly  1135 DEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQRQLVCLARAILRENRILVMDEATANV 1199
            |..|||||...|:||.:|..|.||::.|.|||.|:|||||||:.||||:||.::|||:|||||:|
plant  1341 DAGLWEALHRAHIKDVISRNPFGLDAEVCEGGENFSVGQRQLLSLARALLRRSKILVLDEATASV 1405

  Fly  1200 DPQTDALIQSTIRRKFRDCTVLTIAHRLNTIIDSDRVMVLDAGTLVEFGSPFELLTQSWSKVFYG 1264
            |.:||:|||.|||.:|:.||:|.||||||||||.|:::||.:|.::|:.||.|||::..| .|:.
plant  1406 DVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTS-AFFR 1469

  Fly  1265 MVLQTGRSSFEHLLKLALEAHE 1286
            ||..||.::.::|..|..|..|
plant  1470 MVHSTGPANAQYLSNLVFERRE 1491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 464/1291 (36%)
ABC_membrane 92..362 CDD:294371 88/278 (32%)
ABCC_MRP_domain1 412..611 CDD:213217 87/200 (44%)
ABC_membrane 718..981 CDD:294371 79/283 (28%)
ABCC_MRP_domain2 1029..1250 CDD:213211 123/221 (56%)
ABCC12NP_001319111.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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