DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9270 and haf-8

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_502776.1 Gene:haf-8 / 190369 WormBaseID:WBGene00001818 Length:633 Species:Caenorhabditis elegans


Alignment Length:545 Identity:131/545 - (24%)
Similarity:254/545 - (46%) Gaps:61/545 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   756 FSGINAALVIFALL-------RTLLFFSMAMHSSTQLHN---TMFQGVSRTALYFFHANPSGRIL 810
            |..|..|.::.||:       ::..:|.|.........|   .:|:.:....:.||..|.:|:::
 Worm    91 FDIIKRACLLLALIQFSEATCKSACYFFMQYAEKLTARNIRIQLFRSILHQEISFFDENKTGQLV 155

  Fly   811 NRFAMDLGQVDEILPAVMLDCI--QIFLTISGIIGVLCITNPWYLINTITMFLAFH---FLRTFY 870
            :|...|...:...|| |.::.:  .:|:....|..:.|.:  |.|  |:|.|:.|.   .:..:|
 Worm   156 SRITHDSESISNTLP-VHIETLVNNLFMFFGSIPIMFCYS--WQL--TLTSFIEFPITLLMTRYY 215

  Fly   871 LSTSRDLKRLEAIARSPMYSHFSATLNGLSTIRAMEAQDLLTKEY-DNYQDIHSSGYYTFLSTNR 934
            ......|...|..|.:.........|:.:.|:|:..|::...|.| .|.:|     ::...:...
 Worm   216 GLAVEKLSEKENDATAASNETVEEVLSAIRTVRSFAAENFEQKRYTKNTED-----WFKISTKTV 275

  Fly   935 AFGYYLDLFCVAYVISVTLMSYFNPPVDNPGQI---GLVITQAMSMTGTVQWGMRQSAELENSMT 996
            ..|...:.|....:.|..::.|.     ..|.:   |.:..:|:.......|.:..:....:|:.
 Worm   276 TLGTIYNYFWALMLRSQDVIRYL-----YGGYLALNGRMAPEALLTFIFYHWRLHTAINAFSSLF 335

  Fly   997 S-VERVL----EYRHLEAEGEFESPDDKKPPMNW------PQ-EGLISAEQLSLRYNPDPKADRV 1049
            | |.:.:    :..||         .::||.:::      |: :|.|..|.:...| |..|...|
 Worm   336 SGVMKTIGLSRKVIHL---------INRKPQLDYDFGTETPEIQGKIEFEVVEFAY-PTRKTVNV 390

  Fly  1050 LKSLNFIIMPREKIGIVGRTGAGKSSLINALFRLSY--NEGSLVIDNTDILGIGLHDLRSKISII 1112
            :..:|..|...:.:.:||.:|.|||:|: :|.:..|  ..|.::.|...|..|......|.|:::
 Worm   391 INGINLSIESGKTVALVGPSGNGKSTLV-SLIQQFYTPQSGRILTDGIPIQNINHQHYHSNIALV 454

  Fly  1113 PQEPVLFSGTLRCN-LDPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQRQL 1176
            .|||.|||||:|.| |...|...:|.:.:|.|..::.:.||::.:|.::...|.|...|.||:|.
 Worm   455 AQEPTLFSGTIRENILFGIENGTEEAMLKAAEMANVHEFVSKMDDGYDTKCGEKGVQMSGGQKQR 519

  Fly  1177 VCLARAILRENRILVMDEATANVDPQTDALIQSTIRRKFRDCTVLTIAHRLNTIIDSDRVMVLDA 1241
            :.:|||::|..|:|::||||:.:|.:::.::|..:.:..::.||:.|||||:|:..:.::.|::.
 Worm   520 IAIARALIRNPRVLILDEATSALDSESEGMVQEALNKCAKERTVIVIAHRLSTVRKAQKIAVIEN 584

  Fly  1242 GTLVEFGSPFELLTQSWSKVFYGMV 1266
            |::.|.|...||: ::...::|.:|
 Worm   585 GSVKEMGCHDELM-ENQDGLYYKLV 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 129/534 (24%)
ABC_membrane 92..362 CDD:294371
ABCC_MRP_domain1 412..611 CDD:213217
ABC_membrane 718..981 CDD:294371 46/243 (19%)
ABCC_MRP_domain2 1029..1250 CDD:213211 72/223 (32%)
haf-8NP_502776.1 MdlB 42..613 CDD:224055 131/545 (24%)
ABC_membrane 63..318 CDD:279056 46/241 (19%)
ABC_MTABC3_MDL1_MDL2 373..611 CDD:213216 75/239 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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