DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9270 and mrp-4

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_509658.1 Gene:mrp-4 / 181202 WormBaseID:WBGene00003410 Length:1573 Species:Caenorhabditis elegans


Alignment Length:1373 Identity:475/1373 - (34%)
Similarity:726/1373 - (52%) Gaps:175/1373 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GRKKTLEPTDLYNALKEHKAETLGDKFFATWQSEVRS---------------------------- 68
            |.||.||.:|||:..:...:..|..|::..|..:.:.                            
 Worm   240 GVKKPLEVSDLYSLNEADTSNLLVPKWYNLWDKQSKKFEETAARRRIGSNASRTNRRRTSSNDTT 304

  Fly    69 ---------------CGDSPKKEPSIIRVILKVFGWQLFLSGIVVGVLELGTRATLPLILGALIA 118
                           .|.|.:|.||||..:..:|.|.: ::.:.|.:|........||:|.:|| 
 Worm   305 PLLNDQSTDDYGSVPAGQSTQKMPSIIWTLFLMFKWDV-ITAMFVKLLSDVLLFCNPLLLKSLI- 367

  Fly   119 EFTRNGNGDGLWAQIYGLTLILSILF-----SVLMFHPLMMGLMHLAMKMRVAVSTAIYRKALRL 178
            .||...... :|   .|:.|..::.|     |:|:.|...: :..:..:::..::.|:|||.|||
 Worm   368 RFTEELERP-MW---QGVVLAFTMFFSAELSSILLSHYFYL-MYRVGTRVQTCLTAAVYRKTLRL 427

  Fly   179 SRTALGDTTTGQVVNLISNDLGRFDRALIHFHFLWLGPLELLISSYFLYQQIGVASLYGIVILLL 243
            |..|..:.|.|::|||::.|:.||.:........|..|.::.::.:.|:||:||:...|:.:::|
 Worm   428 SNAARREKTVGEIVNLMAIDVDRFQQITPQTMQYWSNPFQIGLALFLLFQQLGVSVFSGVAVMVL 492

  Fly   244 FLPIQTFLSRLTSRLRHQTALRTDQRVRMMNEIISGIQVIKMYTWEKPFGRLIERLRRSEMSSIR 308
            ..||...::.:..:.:.......|:|.:|:||:::||:|||:|.||.|..::||.||..|:..|:
 Worm   493 LFPINFVITMIIRKWQIAQMYYKDERTKMVNEVLNGIKVIKLYAWEPPMEQVIEDLREQELGLIK 557

  Fly   309 KVNYIR------GTLLSFEITLSRIAIFVSLLGFVLMGGELTAERAFSVTAFYNILRRTVCKFFP 367
            |..::|      .|...|.:.||..|.|:    ::.....||.|.||.....:|.||        
 Worm   558 KAAFLRTFSDMLNTASPFLVALSTFATFI----YIDPKNVLTPEIAFVSLTLFNQLR-------- 610

  Fly   368 SGMSQFAEM-------MVTLRRIKGFMMRSE--TEALYLKGGQTNKLFEGEPLVKLQSFQARWNH 423
            |.|||.||:       :|:.||:|.|::..|  .||:      .::..:...::.|:.....|..
 Worm   611 SPMSQVAELITQTVQVVVSNRRLKEFLVSEELNVEAI------DHRARDNNDVICLKEACLSWES 669

  Fly   424 DHVEPV--LENINISLSPPQLVAVIGPVGSGKSSLIQAILGELPGESGKLKVQGDISYASQEPWL 486
            ...:||  |.||:.|::..|||.::|.||:||||::||::||:...||.:.:.|.:.|..|:||:
 Worm   670 AEHQPVPTLTNISFSVNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQPWM 734

  Fly   487 FNASVRDNILFGLPMDKHRYRNVIRNCALERDFELLH-GDRTFVGERGASLSGGQRARISLARAV 550
            .|.::|.||.||...|::.|..|:..|||.||.::|. ||.|.:||:|.:|||||:|||||||||
 Worm   735 QNNTLRQNITFGKQFDEYFYSRVLDACALYRDLQILPLGDNTEIGEKGINLSGGQKARISLARAV 799

  Fly   551 YRQADTYLLDDPLSAVDTHVGRHLFEECM--RGFLRDKLVILVTHQLQFLEHADLIVIMDKGKIS 613
            |:..|.||||||:||||.|||..||...:  .|.||:|..||||::|.|||.:|||::|::|||.
 Worm   800 YQNHDIYLLDDPMSAVDAHVGSQLFGSVIGPEGMLRNKTRILVTNELSFLEKSDLIIVMNEGKIE 864

  Fly   614 AVGTYEEMLKSGQDFGKLLATEAQEMGDSNQEQVNAEGDSRNDK--------------------- 657
            ..|.|:::::.|. |.:||....:|..:..:.:.:|:.|..|.:                     
 Worm   865 YSGKYDDLMQQGA-FEQLLIECEKEERERREAEASADEDDENSEPGGIMIGGDSDFEYDDDVMAS 928

  Fly   658 ------------STYS-------------RQSSRVSRV-----SVTSVDSSTESILDNERQPAQE 692
                        ||.|             :|..|:|..     |:||..:.|..:...||.    
 Worm   929 PIIDHVLGTSHMSTVSGIINRRRISTSTHKQRRRLSTTKSHTHSITSASTQTRQLTGTERV---- 989

  Fly   693 SRSQGKIGLGIYGKYFSAGSGWLMVILVAFFCLG---TQILASGGDYFLSYWVKNNDSSSSTD-- 752
              ..|::.:..|.|||.| .|..:.:|   |.||   :.|.:.|.:.:|:.|..:|.:.|.::  
 Worm   990 --ETGRVKMDTYYKYFGA-MGMSIAVL---FVLGMTTSTIFSMGRNLWLTDWSNDNAARSGSNTT 1048

  Fly   753 ---------IYIFSGINAALVIFALLRTLLFFSMAMHSSTQLHNTMFQGVSRTALYFFHANPSGR 808
                     :|...|.:..:::|..:.:||:..::  :|..||..:.:.:.|..:.|:...|.||
 Worm  1049 GQPIAIRLGVYAGLGFSEIILLFIGMLSLLYGGVS--ASRNLHAPLMRNLFRVPMAFYDTTPFGR 1111

  Fly   809 ILNRFAMDLGQVDEILPAVMLDCIQIFLTISGIIGVLCITNPWYLINTITMFLAFHFLRTFYLST 873
            ||||...|:..||.:||..:....|..|.:...:.::.|:.|.:.|..|.:.:.:..:..:|::|
 Worm  1112 ILNRIGKDIETVDVLLPFNVQFFAQCLLQVVSTLIIIMISTPVFGIVIIPLSVMYLMVMRYYIAT 1176

  Fly   874 SRDLKRLEAIARSPMYSHFSATLNGLSTIRAMEAQDLLTKEYDNYQDIHSSGYYTFLSTNRAFGY 938
            ||.|||||:|.|||:|||.|.::.|.:||||....|...|..:...|.|....|.....||....
 Worm  1177 SRQLKRLESITRSPIYSHLSESIQGSATIRAYHLVDRFCKLSETKVDSHVQCRYLNYVANRWLSV 1241

  Fly   939 YLDLFCVAYVISVTLMSYFNPPVDNPGQIGLVITQAMSMTGTVQWGMRQSAELENSMTSVERVLE 1003
            .|:......|:...|.:.........|.|||.::.|:::|..:.:.:||..:||.::.|||||.|
 Worm  1242 RLEFIGNCIVLFSALFAALTRTTTTSGVIGLSVSYALNITTVLNFAVRQITKLETNIVSVERVKE 1306

  Fly  1004 YRHLEAEGEFESPDDKKPPMNWPQEGLISAEQLSLRYNPDPKADRVLKSLNFIIMPREKIGIVGR 1068
            |...|.|.|::|...|:||.|||.||.|.....|.||.|.  .:.|:|.||..|.|.||:|||||
 Worm  1307 YAETETEAEWKSEPGKEPPQNWPSEGRIVMNNYSARYRPG--LNLVVKQLNVEIKPHEKVGIVGR 1369

  Fly  1069 TGAGKSSLINALFR-LSYNEGSLVIDNTDILGIGLHDLRSKISIIPQEPVLFSGTLRCNLDPFEQ 1132
            |||||||:..:||| :...||.:|:|..::..||||||||.::||||:|||||||||.|||||..
 Worm  1370 TGAGKSSVTLSLFRIIEAAEGQIVVDGINLAEIGLHDLRSNLTIIPQDPVLFSGTLRFNLDPFNH 1434

  Fly  1133 YADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQRQLVCLARAILRENRILVMDEATA 1197
            |:|..:|:.||..:||:..:.....|..::.|||.|.|||||||||||||:||:.|:|::|||||
 Worm  1435 YSDGDIWKTLEMANLKEFATAHNEQLNYIITEGGDNISVGQRQLVCLARALLRKTRVLILDEATA 1499

  Fly  1198 NVDPQTDALIQSTIRRKFRDCTVLTIAHRLNTIIDSDRVMVLDAGTLVEFGSPFELLTQSWSKVF 1262
            .||..||||||.|||.:|.:.||||||||||||:|.||::||:.|.:.||.||..||:...|: |
 Worm  1500 AVDVSTDALIQKTIREEFANATVLTIAHRLNTIMDYDRIIVLNDGKVGEFDSPANLLSNRNSE-F 1563

  Fly  1263 YGMVLQTG 1270
            |.|..:.|
 Worm  1564 YSMAKRAG 1571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 470/1358 (35%)
ABC_membrane 92..362 CDD:294371 80/280 (29%)
ABCC_MRP_domain1 412..611 CDD:213217 97/203 (48%)
ABC_membrane 718..981 CDD:294371 76/276 (28%)
ABCC_MRP_domain2 1029..1250 CDD:213211 125/221 (57%)
mrp-4NP_509658.1 MRP_assoc_pro 17..1572 CDD:188098 475/1373 (35%)
ABC_membrane 346..613 CDD:294371 81/284 (29%)
ABCC_MRP_domain1 658..862 CDD:213217 97/203 (48%)
ABC_membrane 1012..1259 CDD:294371 70/251 (28%)
ABCC_MRP_domain2 1332..1552 CDD:213211 125/221 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.730

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