DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9270 and Abcc4

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:XP_038948894.1 Gene:Abcc4 / 170924 RGDID:620266 Length:1382 Species:Rattus norvegicus


Alignment Length:1373 Identity:583/1373 - (42%)
Similarity:840/1373 - (61%) Gaps:116/1373 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KLQTNPRESAGIFSTLMFCFALPILFKGRKKTLEPTDLYNALKEHKAETLGDKFFATWQSEV-RS 68
            :::.||.:.|.:.|.|.|.:..|:...|.|:.||..|:::.|.|.:::.||::....|..|| |:
  Rat     7 EVKPNPLQDANLCSRLFFWWLNPLFKAGHKRRLEEDDMFSVLPEDRSKHLGEELQGYWDKEVLRA 71

  Fly    69 CGDSPKKEPSIIRVILKVFGWQLFLSGIVVGVLELGTRATLPLILGALIAEFTRNGNGDGL---- 129
            ..|:  ::||:.:.|:|.: |:.:|...:..::|..||...|:.||.:|..|.:..:.|..    
  Rat    72 KKDA--RKPSLTKAIVKCY-WKSYLILGIFTLIEETTRVVQPIFLGKIIDYFEKYDSDDSAALHT 133

  Fly   130 ---WAQIYGL-TLILSILFSVLMFHPLMMGLMHLAMKMRVAVSTAIYRKALRLSRTALGDTTTGQ 190
               :|.:..| ||||:||..:..:|....|     |::|||:...|||||||||.:|:|.|||||
  Rat   134 AYGYAAVLSLCTLILAILHHLYFYHVQCAG-----MRIRVAMCHMIYRKALRLSNSAMGKTTTGQ 193

  Fly   191 VVNLISNDLGRFDRALIHFHFLWLGPLELLISSYFLYQQIGVASLYGIVILLLFLPIQTFLSRLT 255
            :|||:|||:.:||:..|..||||.|||:.:..:..|:.:||::.|.|:.||::.||:|:.:.:|.
  Rat   194 IVNLLSNDVNKFDQVTIFLHFLWAGPLQAIGVTILLWVEIGISCLAGLAILVILLPLQSCIGKLF 258

  Fly   256 SRLRHQTALRTDQRVRMMNEIISGIQVIKMYTWEKPFGRLIERLRRSEMSSIRKVNYIRGTLLSF 320
            |.||.:||..||.|:|.|||:|:|:::||||.|||.|..||..||:.|:|.|...:|:||..::.
  Rat   259 SSLRSKTAAFTDARIRTMNEVITGMRIIKMYAWEKSFADLITNLRKKEISKILGSSYLRGMNMAS 323

  Fly   321 EITLSRIAIFVSLLGFVLMGGELTAERAFSVTAFYNILRRTVCKFFPSGMSQFAEMMVTLRRIKG 385
            ....:::.:||:...:||:|.::||...|.....|..:|.||..||||.:.:.:|.:|::||||.
  Rat   324 FFIANKVILFVTFTTYVLLGNKITASHVFVAMTLYGAVRLTVTLFFPSAIERVSEAVVSVRRIKN 388

  Fly   386 FMMRSETEALYLKGGQTNKLFEGEPLVKLQSFQARWNHDHVEPVLENINISLSPPQLVAVIGPVG 450
            |::..|     |...:..:..:|:.:|.:|.|.|.|:.....|.|:.::.:..|.:|:||:||||
  Rat   389 FLLLDE-----LPERKAQEPSDGKAIVHVQDFTAFWDKALDTPTLQGLSFTARPGELLAVVGPVG 448

  Fly   451 SGKSSLIQAILGELPGESGKLKVQGDISYASQEPWLFNASVRDNILFGLPMDKHRYRNVIRNCAL 515
            :|||||:.|:|||||..||.:.|.|.|:|.||:||:|:.:||.|||||...:|.||..||:.|||
  Rat   449 AGKSSLLSAVLGELPPTSGLVSVHGRIAYVSQQPWVFSGTVRSNILFGRKYEKERYEKVIKACAL 513

  Fly   516 ERDFELLH-GDRTFVGERGASLSGGQRARISLARAVYRQADTYLLDDPLSAVDTHVGRHLFEECM 579
            ::|.:||. ||.|.:|:|||:|||||:||::||||||:.||.|||||||||||..||:|||:.|:
  Rat   514 KKDLQLLEDGDLTVIGDRGATLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVGKHLFQLCI 578

  Fly   580 RGFLRDKLVILVTHQLQFLEHADLIVIMDKGKISAVGTYEEMLKSGQDFGKLLATEAQEMGDSNQ 644
            ...|.:|:.||||||||:|:.|..|:|:..|::...|||.|.||||.|||.||..|.:|   :..
  Rat   579 CQTLHEKITILVTHQLQYLKAASHILILKDGEMVQKGTYTEFLKSGVDFGSLLKKENEE---AEP 640

  Fly   645 EQVNAEGDSRN----DKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPA---QESRSQGKIGLG 702
            ..|......||    :.|.:|:||||      .|:........|.|...|   :||||:|:||..
  Rat   641 SPVPGTPTLRNRTFSEASIWSQQSSR------PSLKDGVPDAQDAENTQAAQPEESRSEGRIGFK 699

  Fly   703 IYGKYFSAGSGWLMVILVAFFCLGTQILASGGDYFLSYWVKN----NDSSSSTD----------- 752
            .|..|||||:.|..:|.:....|..|:.....|::||:|...    ||:.::..           
  Rat   700 AYKNYFSAGASWFFIIFLVLLNLMGQVFYVLQDWWLSHWANRQGALNDTKNANGNVTGTLDLSWY 764

  Fly   753 IYIFSGINAALVIFALLRTLLFFSMAMHSSTQLHNTMFQGVSRTALYFFHANP------------ 805
            :.|::|:.|..|:|.:.|:||.|.:.:::|..|||.||:.:.:..:.||..||            
  Rat   765 LGIYTGLTAVTVLFGIARSLLVFYVLVNASQTLHNRMFESILKAPVLFFDRNPIELTQLEVFRVV 829

  Fly   806 ---------------------------------------------SGRILNRFAMDLGQVDEILP 825
                                                         .|||||||:.|:|.:|::||
  Rat   830 DGALDSHRHLSHPHPWPQNGSLQASVTSVTGSDVIRFPEVLLLALPGRILNRFSKDIGHMDDLLP 894

  Fly   826 AVMLDCIQIFLTISGIIGVLCITNPWYLINTITMFLAFHFLRTFYLSTSRDLKRLEAIARSPMYS 890
            ...||.||..|.:..:|.|.....||.||..:.:.:.|..||.::|.||||:||||:..|||::|
  Rat   895 LTFLDFIQTLLLVVSVIAVAAAVIPWILIPLVPLSIIFVVLRRYFLETSRDVKRLESTTRSPVFS 959

  Fly   891 HFSATLNGLSTIRAMEAQDLLTKEYDNYQDIHSSGYYTFLSTNRAFGYYLDLFCVAYVISVTLMS 955
            |.|::|.||.||||.:|::...:.:|.:||:||..::.||:|:|.|...||..|..:||.|...|
  Rat   960 HLSSSLQGLWTIRAYKAEERCQELFDAHQDLHSEAWFLFLTTSRWFAVRLDAICAVFVIVVAFGS 1024

  Fly   956 YFNPPVDNPGQIGLVITQAMSMTGTVQWGMRQSAELENSMTSVERVLEYRHLEAEGEFESPDDKK 1020
            .......:.||:||.::.::::.|..||.:|||||:||.|.|||||:||..||.|..:|.  .|:
  Rat  1025 LVLAKTLDAGQVGLALSYSLTLMGMFQWSVRQSAEVENMMISVERVIEYTDLEKEAPWEC--RKR 1087

  Fly  1021 PPMNWPQEGLISAEQLSLRYNPDPKADRVLKSLNFIIMPREKIGIVGRTGAGKSSLINALFRLSY 1085
            ||..||.||:|..:.::..|:.|  ...|||.|..:|..|||:||||||||||||||:||||||.
  Rat  1088 PPPGWPHEGVIVFDNVNFTYSLD--GPLVLKHLTALIKSREKVGIVGRTGAGKSSLISALFRLSE 1150

  Fly  1086 NEGSLVIDNTDILGIGLHDLRSKISIIPQEPVLFSGTLRCNLDPFEQYADEKLWEALEEVHLKDE 1150
            .||.:.||......|||||||.|:||||||||||:||:|.|||||.:::||:||:|||||.||:.
  Rat  1151 PEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHSDEELWKALEEVQLKEA 1215

  Fly  1151 VSELPNGLESVVAEGGSNYSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQSTIRRKF 1215
            :.:||..:::.:||.|||:|||||||||||||||::||||::|||||||||:||.|||..||.||
  Rat  1216 IEDLPGKMDTELAESGSNFSVGQRQLVCLARAILKKNRILIIDEATANVDPRTDELIQQKIREKF 1280

  Fly  1216 RDCTVLTIAHRLNTIIDSDRVMVLDAGTLVEFGSPFELLTQSWSKVFYGMVLQTGRSSFEHLLKL 1280
            ..|||||||||||||||||::||||:|.|.|:..|:.|| |:...:||.||.|.|:.....|.:.
  Rat  1281 AQCTVLTIAHRLNTIIDSDKIMVLDSGRLREYDEPYVLL-QNPESLFYKMVQQLGKGEAAALTET 1344

  Fly  1281 ALEAHERR 1288
            |.:.:.||
  Rat  1345 AKQVYFRR 1352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 572/1339 (43%)
ABC_membrane 92..362 CDD:294371 109/277 (39%)
ABCC_MRP_domain1 412..611 CDD:213217 108/199 (54%)
ABC_membrane 718..981 CDD:294371 99/334 (30%)
ABCC_MRP_domain2 1029..1250 CDD:213211 141/220 (64%)
Abcc4XP_038948894.1 MRP_assoc_pro 6..1334 CDD:188098 578/1353 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345054
Domainoid 1 1.000 229 1.000 Domainoid score I2384
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1102 1.000 Inparanoid score I217
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm44390
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - O PTHR24223
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.810

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