DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9270 and tap2

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:XP_002942649.3 Gene:tap2 / 100489020 XenbaseID:XB-GENE-481680 Length:728 Species:Xenopus tropicalis


Alignment Length:595 Identity:141/595 - (23%)
Similarity:269/595 - (45%) Gaps:108/595 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   730 LASGGDYFLSYWVKNNDSSSSTDI-------------------YIFSGINAALVIFALLRTLLFF 775
            ||..|:.|:.|::.......||:.                   .||:|....|.:|:|.|.    
 Frog   177 LALIGEMFIPYYMGRVIDILSTNYNEREFLRAMSFMAMFSITSSIFAGSRGGLFMFSLARL---- 237

  Fly   776 SMAMHSSTQLHNTMFQGVSRTALYFFHANPSGRILNRFAMDLGQVDEILPA-------VMLDCIQ 833
                  :.:|...:|:.|.:..:.||.|..||.|.:|...|..:|...:.|       :::.|:.
 Frog   238 ------TQRLRLLLFRSVIKQEIAFFEATKSGDITSRLTNDTARVSRSIAANVNITLRMLVKCVG 296

  Fly   834 IFLTISGIIGVLCITNPWYLINTITMFLA---FHFLRTFYLSTSRDL-KRL-EAIARSPMYSHFS 893
            ::..:..:        .|.|  |:..|::   ...::..|....:|| ||: ::||||...:  .
 Frog   297 VYSFMFSL--------SWQL--TLLTFISSPLTWIIQKVYNYYHQDLVKRVQDSIARSSELA--K 349

  Fly   894 ATLNGLSTIRAMEAQDLLTKEYDN-YQDIHSSGYYTFLSTNRAFGYYLDLFCVAYV---ISVTLM 954
            ..:..:..:.:..|::...|.|:| .|:.|      .|.|.|.|...|.|.....|   ..||::
 Frog   350 EIIESVRNVYSFAAEEEEAKRYENSLQETH------VLQTRRDFVTALYLLVTRLVNLGTQVTML 408

  Fly   955 SYFNPPVDNPGQI----GLV--------ITQAMSMTGTVQWGMRQSAELENSMTSVERVLEYRHL 1007
            .|        |||    |.:        |...|.....::..:...:|:.::..:.|:|.:|.  
 Frog   409 YY--------GQILIRSGFISSGKMVSFILYQMESDSYIRTLVHMLSEITHAAGAAEKVFQYL-- 463

  Fly  1008 EAEGEFESPDDKKPPMN-------WPQEGLISAEQLSLRYNPDPKADRVLKSLNFIIMPREKIGI 1065
                      |::|.::       ...:|......::..|...|:. ..|::::|.:.|.....:
 Frog   464 ----------DREPQVSASGCLCPGTLQGRFEFSNVTFSYPSRPEI-LALQNVSFTLPPGSVTAL 517

  Fly  1066 VGRTGAGKSSLINALFRLSYNE-GSLVIDNTDILGIGLHDLRSKISIIPQEPVLFSGTLRCNLDP 1129
            ||.:|.||::.::.|.|....: |::::|...:.......|.||::::.||||||:|::|.|:. 
 Frog   518 VGPSGGGKTTCVSLLERFYEPQGGNILLDGKPLKEYKHEYLHSKVALVAQEPVLFAGSVRENIS- 581

  Fly  1130 FEQY--ADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQRQLVCLARAILRENRILVM 1192
            :..|  .:|||..|..:...:|.:..:....::.|...|:..|.||:|.|.||||:.|:.::|::
 Frog   582 YGLYNIPEEKLKAAARKAKAEDFIEGMEKAYDTDVGNSGAQLSAGQKQRVALARALARKPKLLIL 646

  Fly  1193 DEATANVDPQTDALIQSTIRRKFRDCTVLTIAHRLNTIIDSDRVMVLDAGTLVEFGSPFELLTQS 1257
            |||::.:|.:|:..||.:: :...|.::|.|||||.|:..:|:::||:||.|||.|:..:|:.: 
 Frog   647 DEASSCLDAETEHEIQKSL-QSIEDLSLLIIAHRLRTVQKADQILVLEAGNLVEQGTHEKLVQKX 710

  Fly  1258 WSKVFYGMVL 1267
            ...:...:|:
 Frog   711 RECITVSLVV 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 140/583 (24%)
ABC_membrane 92..362 CDD:294371
ABCC_MRP_domain1 412..611 CDD:213217
ABC_membrane 718..981 CDD:294371 63/297 (21%)
ABCC_MRP_domain2 1029..1250 CDD:213211 70/223 (31%)
tap2XP_002942649.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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