DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9270 and tap1

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:XP_002665053.1 Gene:tap1 / 100333043 ZFINID:ZDB-GENE-050517-43 Length:731 Species:Danio rerio


Alignment Length:613 Identity:137/613 - (22%)
Similarity:282/613 - (46%) Gaps:97/613 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   691 QESRSQGKIGLGIYGKYFSAGSGWLMVILVAFFCLGTQILASGGDYFLSY-------WVKNNDSS 748
            :.:..:||..|.....|....||....:   ||.:   :::|.|:..:.:       |:.|.|..
Zfish   138 ERTEKKGKASLQRLLGYMKPFSGRFAAV---FFFV---VISSLGEMAIPHYTGKMTDWIMNEDEP 196

  Fly   749 SSTDIYIFSGINAALVIFALLRTL---------LFFSMAM---HSSTQLHNTMFQGVSRTALYFF 801
            .:        .|.|:.:..|:..:         |.:::.|   |:|.|  ..:||.|.:..:.||
Zfish   197 EA--------FNHAITVMTLMTIMSAVCEFVCDLIYNITMSRIHTSIQ--GLVFQAVLKQDIAFF 251

  Fly   802 HANPSGRILNRFAMDLGQVDEILPAVMLDCIQIFLTISGIIG--------VLCITNPWYLINTIT 858
            ....:|.|::|...|...:.|.|...:...:..|:.:..:.|        :.|.|    |:....
Zfish   252 DKATTGDIVSRITTDTNTMSESLSEKLSLLMWYFMRVIFLFGSMLMLSTRLCCFT----LLGLPV 312

  Fly   859 MFLAFHFLRTFYLSTSRDLKRLEAIARSPMYSHFSATLNGLSTIRAMEAQDLLTKEY-----DNY 918
            :::.......||...|..::  :::|::...:  :.|.:.:.|:|:...:|..|:.|     |.:
Zfish   313 IWIIPEIFGRFYQKLSAQVQ--DSLAKANEVA--TETFSSMKTVRSFANEDGETERYRKCLEDTF 373

  Fly   919 --QDIHSSGYYTFLSTNRAFGYYLDLFCVAYVISVTLMSYFNPPVD----NPGQIGLVITQAMSM 977
              ..:.::.|.....||.         ..:..:.|:::.|....|.    :.|.:...:...:..
Zfish   374 ALNKVEAAAYAVSTWTNS---------MSSLALKVSILYYGGRLVTGSDVSSGDLVSFVLYELQF 429

  Fly   978 TGTVQWGMRQSAELENSMTSVERVLEYRHLEAEGEFESPDDKKPPMNWPQEGLISAEQL------ 1036
            |..|:..|.....::.::.:.|::.||            .|:||.:  |.:|.::.:.|      
Zfish   430 TSAVEVLMSYWPHVKKAVGASEKIFEY------------VDRKPDV--PPDGSLAPKTLKGHVQF 480

  Fly  1037 ---SLRYNPDPKADRVLKSLNFIIMPREKIGIVGRTGAGKSSLINALFRL-SYNEGSLVIDNTDI 1097
               :..|...|..| |||:::..:...:...:||.:|:||:::::.|.|. ....|.:::|...:
Zfish   481 RNVTFAYPKRPDTD-VLKNVSLELKAGKITALVGPSGSGKTTVVSLLERFYQPQNGEILLDQKPL 544

  Fly  1098 LGIGLHDLRSKISIIPQEPVLFSGTLRCNLDPFEQYA-DEKLWEALEEVHLKDEVSELPNGLESV 1161
            |......|..|||::.||||||:.::|.|:...::.| :|:::.|....:..|.:|.||.|.::.
Zfish   545 LSYKDQYLHEKISVVSQEPVLFARSVRENIKYGKENATNEEIYAAARLANAHDFISSLPKGYDTD 609

  Fly  1162 VAEGGSNYSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQSTIRRKFRDCTVLTIAHR 1226
            ..|.|...|.||:|.:.:|||::::.:|||:|:||:::|.:::..:.|.::::.:.||||.|:||
Zfish   610 AGEKGGQVSGGQKQRIAIARALIQKPQILVLDDATSSLDTESEHRVYSALKKELQSCTVLLISHR 674

  Fly  1227 LNTIIDSDRVMVLDAGTLVEFGSPFELL 1254
            |:.:.::|.::.|..|.|||.|:..:||
Zfish   675 LSGVENADHILFLREGELVEEGNHQQLL 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 137/613 (22%)
ABC_membrane 92..362 CDD:294371
ABCC_MRP_domain1 412..611 CDD:213217
ABC_membrane 718..981 CDD:294371 50/300 (17%)
ABCC_MRP_domain2 1029..1250 CDD:213211 70/231 (30%)
tap1XP_002665053.1 3a01208 42..712 CDD:273363 137/613 (22%)
ABC_membrane 166..433 CDD:279056 50/296 (17%)
P-loop_NTPase 467..692 CDD:304359 66/225 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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