DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9270 and abcc3

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_001107301.1 Gene:abcc3 / 100135090 XenbaseID:XB-GENE-1003737 Length:1531 Species:Xenopus tropicalis


Alignment Length:1351 Identity:476/1351 - (35%)
Similarity:740/1351 - (54%) Gaps:119/1351 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PRESAGIFSTLMFCFALPILFKGRKKTLEPTDLY-------------NALKEHKAE--------- 52
            |...||..|.|.|.:...:...|.|:.||..||:             |.:||.:.|         
 Frog   208 PESDAGFLSRLTFWWFTKMAILGYKRPLEDKDLWSLNEDDTSNVVVTNLIKEWEKEKSNLAQMQV 272

  Fly    53 --------TLGDKFFATWQSEVRSCGDSPKKEPSIIRVILKVFGWQLFLSGIVVGVLELGTRATL 109
                    .|.......::|:|....:...||||.::|:|:.|| ..||.|....:.:.......
 Frog   273 SYSKKPEAVLNHTDEKAYESDVLIVDNKKPKEPSFLKVLLRTFG-PYFLIGSFFKLFQDLLSFVN 336

  Fly   110 PLILGALIAEFTRNGNGDGLWAQIYGLTLILSILFSVLMFHPLMMGLMHLAMKMRVAVSTAIYRK 174
            |.:|..||. |.:|.:....|.....:.:.|:.|...|:.|..........|::|.|::..||||
 Frog   337 PQLLSILIT-FIKNKDAPSWWGFCIAVLMFLTSLVQTLILHQHFQYCFVTGMRLRSAITGIIYRK 400

  Fly   175 ALRLSRTALGDTTTGQVVNLISNDLGRFDRALIHFHFLWLGPLELLISSYFLYQQIGVASLYGIV 239
            :|.::.:|...:|.|:||||:|.|..||.......:.||..||::.::.|||:|.:|.:.|.|:.
 Frog   401 SLVITNSAKRSSTVGEVVNLMSVDAQRFQDLTTFLNMLWSAPLQICLALYFLWQALGPSVLAGVA 465

  Fly   240 ILLLFLPIQTFLSRLTSRLRHQTALRTDQRVRMMNEIISGIQVIKMYTWEKPFGRLIERLRRSEM 304
            :::|.:||..|::..|...:.:.....|.|:::||||::||:|:|:|.||..|.:.:..:|..|:
 Frog   466 VMVLLIPINAFIAMKTRAFQVEQMQYKDSRIKLMNEILNGIKVLKLYAWEPSFAQKVLEIRNKEL 530

  Fly   305 SSIRKVNYIRG------TLLSFEITLSRIAIFVSLLGFVLMGGELTAERAFSVTAFYNILRRTVC 363
            :.::|..|:..      |...|.:.|:..|::|:    |.....|.||:||...:.:||||..: 
 Frog   531 NILKKAAYLNALSTFAWTSAPFLVALTTFAVYVT----VDEKNILDAEKAFVSLSLFNILRFPL- 590

  Fly   364 KFFPSGMSQFAEMMVTLRRIKGFMMRSETEALYLKGGQTNKLFEGEPLVKLQSFQARWNHDHVEP 428
            ...|..:|..|:..|:::||:.|:...|   |.|.....:|...|. .:.:.:....|..:. ..
 Frog   591 NMLPQVISNLAQASVSIKRIQNFLANDE---LDLNAVTKDKTLPGN-AITVHNGTFSWAKNG-GA 650

  Fly   429 VLENINISLSPPQLVAVIGPVGSGKSSLIQAILGELPGESGKLKVQGDISYASQEPWLFNASVRD 493
            :|:|||:.:....||||:|.||.|||||:.|:|||:..|.|::.|:|.::|..|:.|:.|.:::|
 Frog   651 ILQNINLLVPSGSLVAVVGQVGCGKSSLVSALLGEMEKEEGEVSVRGSVAYVPQQAWIQNCTLKD 715

  Fly   494 NILFGLPMDKHRYRNVIRNCALERDFELL-HGDRTFVGERGASLSGGQRARISLARAVYRQADTY 557
            |||||...::..|:.|:..|||..|.|:| .||:|.:||:|.:|||||:.|:||||||:..||.|
 Frog   716 NILFGRAANEKNYKKVLEACALVTDLEVLPGGDQTEIGEKGINLSGGQKQRVSLARAVFSNADVY 780

  Fly   558 LLDDPLSAVDTHVGRHLFEECM--RGFLRDKLVILVTHQLQFLEHADLIVIMDKGKISAVGTYEE 620
            ||||||||||.||.:|:|:..:  .|.||.|..:||||.:.||...|.||::..|:::.:|:|:|
 Frog   781 LLDDPLSAVDAHVAKHIFDNVIGPDGLLRGKTRVLVTHGISFLPQVDHIVVLVDGRVTEMGSYQE 845

  Fly   621 MLKSGQDFGK------------------------LLATEA----QEMGDS------------NQE 645
            :||....|.:                        |||.|.    .::.|:            .|.
 Frog   846 LLKQNGAFSEFLRNYAFDDEVEEEDITIPDEEEVLLAEETLSTHTDLADNEPVANEARKKFIRQI 910

  Fly   646 QVNAEGDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPAQESRSQGKIGLGIYGKYFSA 710
            .:.::|:..:..||..|.:.:....::.:....||.::..      |:...|::.:.::.:|..|
 Frog   911 SILSDGEPSHAMSTRRRFTEKKPSENLVAKQPPTEKLIQT------ETTETGRVKMTVFWQYMKA 969

  Fly   711 GSGWLMVILVAFFCLGTQILASGGDYFLSYWVKN---NDSSSSTDIYIFSGINAAL-VIFALLRT 771
             .|..:.:.:.|........|.|.:.:||.|...   |.:..:|.:.:  |:.||| ::..||..
 Frog   970 -VGLAISVFICFLYSCQNAAAIGANVWLSDWTNEPVINQTQQNTQMRV--GVYAALGILQGLLVM 1031

  Fly   772 LLFFSMA---MHSSTQLHNTMFQGVSRTALYFFHANPSGRILNRFAMDLGQVDEILPAVMLDCIQ 833
            ...||:|   :.::.:||:.:......|...|:...|.|||:|||:.|:..:||::|..:|..:.
 Frog  1032 TSSFSLAIAGIGAARKLHSALLDNKMHTPQSFYDTTPIGRIINRFSKDIYVIDEVIPGTILMFLA 1096

  Fly   834 IFLTISGIIGVLCITNPWYLINTITMFLAFHFLRTFYLSTSRDLKRLEAIARSPMYSHFSATLNG 898
            .|.|....:.|:..:.|.:.:..|.:.:|:.|::.||::|||.|||||:::|||:|||||.|:.|
 Frog  1097 TFFTSLSTMIVIVASTPLFAVVIIPLAIAYIFVQRFYVATSRQLKRLESVSRSPIYSHFSETITG 1161

  Fly   899 LSTIRAMEAQDLLTKEYDNYQDIHSSGYYTFLSTNRAFGYYLDLFCVAYVISVTLMSYFNPPVDN 963
            .|.|||...|:......||..|.:...||..:.:||..|..::......|:...|.:.......:
 Frog  1162 ASIIRAYGRQNSFIVLSDNKVDENQKSYYPGIVSNRWLGVRVEFVGNCVVLFAALFAVLGREHLS 1226

  Fly   964 PGQIGLVITQAMSMTGTVQWGMRQSAELENSMTSVERVLEYRHLEAEGEFESP---DDKKPPMNW 1025
            ||.:||.::.|:.:|.::.|.:|.:::||.::.:||||.||    ||.|.|:|   :|.|||.:|
 Frog  1227 PGLVGLSVSYALQVTMSLNWMVRMTSDLETNIVAVERVKEY----AENETEAPWHIEDTKPPEDW 1287

  Fly  1026 PQEGLISAEQLSLRYNPDPKADRVLKSLNFIIMPREKIGIVGRTGAGKSSLINALFR-LSYNEGS 1089
            |.:|.:.....|:||...  .|.|||:||..:...||:||||||||||||:...||| |...||.
 Frog  1288 PSKGEVELSNYSVRYRAG--LDLVLKNLNLKVNGGEKVGIVGRTGAGKSSMTLCLFRILEPAEGI 1350

  Fly  1090 LVIDNTDILGIGLHDLRSKISIIPQEPVLFSGTLRCNLDPFEQYADEKLWEALEEVHLKDEVSEL 1154
            :.|||.:|..|||.||||:::||||:|||||||||.|||||.:|:|:::|:|||..:||..|:..
 Frog  1351 VKIDNVNISEIGLQDLRSRLTIIPQDPVLFSGTLRMNLDPFNKYSDDEIWKALELSNLKKFVAGQ 1415

  Fly  1155 PNGLESVVAEGGSNYSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQSTIRRKFRDCT 1219
            |:.||...:|||.|.|||||||||||||:||:.|||::|||||.:|.:||.|||.|||.:|.|||
 Frog  1416 PSQLEYECSEGGENLSVGQRQLVCLARALLRKTRILILDEATAAIDLETDDLIQMTIRTQFEDCT 1480

  Fly  1220 VLTIAHRLNTIIDSDRVMVLDAGTLVEFGSPFELLTQSWSKVFYGMVLQTG 1270
            |||||||||||:|..||:|||.|.:.||.:|..|:  :...:||||....|
 Frog  1481 VLTIAHRLNTIMDYTRVLVLDKGRIAEFDTPTNLI--ALKGIFYGMAKDAG 1529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 471/1336 (35%)
ABC_membrane 92..362 CDD:294371 82/275 (30%)
ABCC_MRP_domain1 412..611 CDD:213217 91/201 (45%)
ABC_membrane 718..981 CDD:294371 81/269 (30%)
ABCC_MRP_domain2 1029..1250 CDD:213211 131/221 (59%)
abcc3NP_001107301.1 MRP_assoc_pro 7..1530 CDD:188098 476/1351 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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