DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9270 and abcc5

DIOPT Version :9

Sequence 1:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster
Sequence 2:XP_012818083.1 Gene:abcc5 / 100125060 XenbaseID:XB-GENE-986260 Length:1437 Species:Xenopus tropicalis


Alignment Length:1366 Identity:440/1366 - (32%)
Similarity:717/1366 - (52%) Gaps:154/1366 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NPRESAGIFSTLMFCFALP---ILFKGRKKTLEPTDLYNALKEHKAETLGDKFFATWQSEVRSCG 70
            :|.::||:||.:.|.:..|   |.:|  |..|...|::...|...::....:....|..||...|
 Frog   100 HPVDNAGLFSFMTFSWLTPMARIAYK--KGELFFEDIWPLSKHESSDINSKRLEKLWLEEVTEKG 162

  Fly    71 DSPKKEPSIIRVILKVFGWQLFLSGIVVGVLELGTRATLPLILGALIA----EFTRNGNGDGLWA 131
            .......|::        |....:.:::.::.|........|..|.:.    |:|:..:.|.   
 Frog   163 ADESSLRSVV--------WHFCRTRLIISIMCLMLTQLAGFIGPAFVVKSLLEYTQQSSKDP--- 216

  Fly   132 QIYGLTLILSILFSVLMFHPLMMGLMHL--------AMKMRVAVSTAIYRKALRLSRTALGDTTT 188
               |.:|:|  :|::||...:....:.|        ..::|.||.|..::|.|:|..  :.:.:.
 Frog   217 ---GYSLLL--VFALLMTEIVRSWSLALTWALNYRTGSRLRGAVLTMAFKKILKLKN--IKEKSM 274

  Fly   189 GQVVNLISNDLGRFDRALIHFHFLWLGPLELLISSYFLYQQIGVASLYGIVILLLFLPIQTFLSR 253
            |:::|:.|:|..|...|......|..||:..::...:....:|.....|..:.:||.|...|:||
 Frog   275 GELINVCSSDGQRMFEAAAVGSLLAGGPIVAILGMIYNVIILGPTGFLGSAVFILFYPAMMFVSR 339

  Fly   254 LTSRLRHQTALRTDQRVRMMNEIISGIQVIKMYTWEKPFGRLIERLRRSEMSSIRKVNYIRGTLL 318
            ||:..|.:....||:||:.|||:::.|:.||||.|.|.|.:.::::|.:|.|.:.:..|.:    
 Frog   340 LTAYFRRKCVSVTDERVQKMNEVLNYIKFIKMYAWVKAFSQNVQKIRENERSILERAGYFQ---- 400

  Fly   319 SFEITLSRIAIFV-SLLGF---VLMGGELTAERAFSVTAFYNILRRTVCKFFPSGMSQFAEMMVT 379
            |..:.::.|.:.: |:|.|   :::|.:|||.:||:|...:|.:...: |..|..:...:|..|:
 Frog   401 SITVGIAPIVVVIASVLTFSVHMILGYDLTAAQAFTVVTVFNSMTFAL-KVTPFSVKSLSEASVS 464

  Fly   380 LRRIKGFMMRSETEALYLKGGQTNKLFE--------------------GEPLVK-----LQSFQA 419
            :.|.|...:..|...:..|....|.:.|                    |.|.:|     ::..:.
 Frog   465 MDRFKSLFLMEEVHMVKKKPSSPNLIIELKNATLAWDTTYASTQCSPKGTPKLKKGKKGVKGKKE 529

  Fly   420 RWNH---------------------DHVEP----------------VLENINISLSPPQLVAVIG 447
            :.:|                     :|..|                .|.:|::.:...:|:.:.|
 Frog   530 KCSHEIEGSQAVLAEQKGHLLIDSDEHPSPDEETKELPVINVKLQRALYSIDLDIEKGKLIGICG 594

  Fly   448 PVGSGKSSLIQAILGELPGESGKLKVQGDISYASQEPWLFNASVRDNILFGLPMDKHRYRNVIRN 512
            .|||||:|||.||||::....|.:.|.|..:|.:|:.|:.||::|||||||...|:..|..|:..
 Frog   595 SVGSGKTSLISAILGQMTLLEGSIAVSGSFAYVAQQAWILNATLRDNILFGKEFDEEEYNAVLNV 659

  Fly   513 CALERDFELL-HGDRTFVGERGASLSGGQRARISLARAVYRQADTYLLDDPLSAVDTHVGRHLFE 576
            |.|..|..:| :||.|.:|||||:||||||.|||||||:|.....|:|||||||:|.|||.|:|.
 Frog   660 CCLRPDLAILPNGDLTEIGERGANLSGGQRQRISLARALYSDRSIYILDDPLSALDAHVGNHIFN 724

  Fly   577 ECMRGFLRDKLVILVTHQLQFLEHADLIVIMDKGKISAVGTYEEMLKSGQDFGKLLATEAQEMGD 641
            ..:|..|:.|.::.:|||||:|...|.::.|.:|.|:..||:|:::|...::..:.  ...::||
 Frog   725 SAIRKHLKSKTILFITHQLQYLVDCDDVIYMKEGCITERGTHEDLIKLNGEYAAIF--NNFQLGD 787

  Fly   642 S-NQEQVNAEGDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILDNERQPAQ-ESRSQGKIGLGIY 704
            : :.||:|.:.:.:|.......:.::...|      ...:::...|.|..| |.:.:|.:...:|
 Frog   788 APHIEQMNLKKNLKNSLKKPLEKGNKAGSV------KKEKTVKKEEGQLMQLEEKGKGSVPWSVY 846

  Fly   705 GKYF-SAGSGWLMVILVAFFCLGTQILASGGDYFLSYWVK----------------NNDSSSSTD 752
            |.|. |||..:..:|::..|.|.....|. .:::||||:|                :|....:..
 Frog   847 GAYIQSAGGPFAFLIIMTLFVLNVGSTAF-SNWWLSYWIKQGSGNTTVVVHNETVVSNSMKDNPH 910

  Fly   753 IYIFSGINA-ALVIFALL---RTLLFFSMAMHSSTQLHNTMFQGVSRTALYFFHANPSGRILNRF 813
            :..::.|.| ::|:..||   |.::|....:.:|::||:.:|:.:.|:.:.||...|:||:||||
 Frog   911 VLFYTAIYALSMVVMLLLKAVRGIVFVKGTLRASSRLHDELFRRILRSPMKFFDTTPTGRVLNRF 975

  Fly   814 AMDLGQVDEILPAVMLDCIQIFLTISGIIGVLCITNPWYLINT---ITMFLAFHFLRTFYLSTSR 875
            :.|:.:||..||......:|..:.:...:||:....||:|:..   :.:|...|.:...::   |
 Frog   976 SKDMDEVDVRLPFQAEMFVQNVILVFFCLGVISFVFPWFLVAVGPLVVLFTILHVVSRVFI---R 1037

  Fly   876 DLKRLEAIARSPMYSHFSATLNGLSTIRAMEAQDLLTKEYDNYQDIHSSGYYTFLSTNRAFGYYL 940
            :|||||.|.:||..||.::::.||:||.|....:.....|....|.:.:.:|.|....|.....|
 Frog  1038 ELKRLENITQSPFLSHITSSIQGLTTIHAYSKGNEFLLRYQELLDNNQAPFYLFNCAMRWLAIRL 1102

  Fly   941 DLFCVAYVISVTLMSYFNPPVDNPGQIGLVITQAMSMTGTVQWGMRQSAELENSMTSVERVLEY- 1004
            |:..|:.:.:..||........:|...||.::.|:.:||..|:.:|.::|.|...|||||:..| 
 Frog  1103 DVISVSLITTTGLMIVLMHGNISPAYAGLAMSYAVQLTGLFQFTVRLASETEARFTSVERINHYI 1167

  Fly  1005 --RHLEAEGEFESPDDKKPPMNWPQEGLISAEQLSLRYNPDPKADRVLKSLNFIIMPREKIGIVG 1067
              ..|||....:   :|.||.:|||||.|..|...:||..:  ...|||.::|.|.|:|||||||
 Frog  1168 KTLALEAPARIK---NKAPPADWPQEGEIKFENAEMRYREN--LPLVLKKVSFTIKPKEKIGIVG 1227

  Fly  1068 RTGAGKSSLINALFRL-SYNEGSLVIDNTDILGIGLHDLRSKISIIPQEPVLFSGTLRCNLDPFE 1131
            |||:||:||..||||| ..:.|.:.||...|..|||.|||||:|||||||||||||:|.|||||.
 Frog  1228 RTGSGKTSLGMALFRLVELSGGCIKIDGVKISDIGLADLRSKLSIIPQEPVLFSGTVRSNLDPFS 1292

  Fly  1132 QYADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQRQLVCLARAILRENRILVMDEAT 1196
            ||::|::|:|||..|:|:.|::||..||:.|.|.|.|:|||:|||:|:||.:||..:||::||||
 Frog  1293 QYSEEQIWDALERTHMKECVAQLPLKLETEVLENGENFSVGERQLMCIARVLLRRCKILILDEAT 1357

  Fly  1197 ANVDPQTDALIQSTIRRKFRDCTVLTIAHRLNTIIDSDRVMVLDAGTLVEFGSPFELLTQSWSKV 1261
            |.:|.:||.|||.|||..|.:||:|||||||:|::..||:|||..|.::|:.:|..||:...::.
 Frog  1358 AAMDTETDLLIQETIREAFAECTMLTIAHRLHTVLSCDRIMVLAQGQVMEYDTPSALLSNENTRF 1422

  Fly  1262 F 1262
            |
 Frog  1423 F 1423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9270NP_995741.2 CFTR_protein 6..1257 CDD:273530 439/1359 (32%)
ABC_membrane 92..362 CDD:294371 72/285 (25%)
ABCC_MRP_domain1 412..611 CDD:213217 89/241 (37%)
ABC_membrane 718..981 CDD:294371 76/285 (27%)
ABCC_MRP_domain2 1029..1250 CDD:213211 124/221 (56%)
abcc5XP_012818083.1 PLN03130 101..1425 CDD:215595 440/1365 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.