Protein Alignment RPA2 and Rpa2

DIOPT Version :10

• Sequence 1: NP_610077.1
• Gene: RPA2 / 35364
• FlyBaseID: FBgn0288834
• Length: 246
• Species: Drosophila melanogaster
• Sequence 2: XP_063144403.1
• Gene: Rpa2 / 59102
• RGDID: 619714
• Length: 284
• Species: Rattus norvegicus
• Alignment Length: 240
• Identity: 59/240 - (24%)
• Similarity: 113/240 - (47%)
• Gaps: 38/240 - (15%)

  Fly    14 APTGAASNQKGEGIVPLVVKQIVDA-------PEGNIELFGMQYAMACVVAIVRNVETSSTKITY 71
            :|..:....:.:.|||..:.|::.|       ..|::|:     :...:|.|:|:.|.:.|.|.|
  Rat    72 SPLCSEQRARAQHIVPCTISQLLSATLTDEVFKIGDVEI-----SQVTIVGIIRHAEKAPTNIVY 131

  Fly    72 TLEDHSGR-IDAHYWLEEGDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLDPNEVCTH 135
            .::|.:.. :|...|::..:                        .|:|:.||::|:.|.||...|
  Rat   132 KIDDMTAAPMDVRQWVDTDN------------------------KKSLVAFKIIPLEDMNEFTAH 172

  Fly   136 LLEVLNARYRAEDYQSKGGAGAGAGASSGSGSIADFTASQSSAIVSGLEPKQQAVFQAIKSNVSE 200
            :|||:|:........|:...|..:.::.|.|...:|:.:.... .:||...|..|...||:....
  Rat   173 ILEVVNSHLMLSKANSQASVGRPSMSNPGMGEPGNFSGNNFMP-ANGLTVVQNQVLNLIKACPRP 236

  Fly   201 EGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHFICT 245
            ||::.::|:::..|:..:.:...:||:.:||||||::|.|||..|
  Rat   237 EGLNFQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFKST 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA2	NP_610077.1	RFA2	12..246	CDD:227560	59/240 (25%)
		RPA2_DBD_D	52..144	CDD:239924	23/92 (25%)
Rpa2	XP_063144403.1	None