| Sequence 1: | NP_001260652.1 | Gene: | RPA2 / 35364 | FlyBaseID: | FBgn0032906 | Length: | 246 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001011943.1 | Gene: | Stn1 / 294025 | RGDID: | 1305637 | Length: | 408 | Species: | Rattus norvegicus |
| Alignment Length: | 259 | Identity: | 44/259 - (16%) |
|---|---|---|---|
| Similarity: | 86/259 - (33%) | Gaps: | 58/259 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 30 LVVKQIVDAPEGNIELFGMQY------AMACVVAIVRNVETSSTKITYTLEDHSGRIDAHYWLEE 88
Fly 89 GDALKA--PEVM--------------------------VNNYVKVYGTTRSQGGSKTLMIFKLLP 125
Fly 126 VLDP--NEVCTHLLEVLNARYRAEDYQSKGGAGAGAGA--SSGSGSIADFTASQSSAI------- 179
Fly 180 ---------VSGLEPKQQAVFQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIY 234 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RPA2 | NP_001260652.1 | RFA2 | 12..246 | CDD:227560 | 44/259 (17%) |
| RPA2_DBD_D | 52..144 | CDD:239924 | 19/121 (16%) | ||
| RPA_C | <182..238 | CDD:285937 | 11/53 (21%) | ||
| Stn1 | NP_001011943.1 | Interaction with CTC1. /evidence=ECO:0000250|UniProtKB:Q9H668 | 8..195 | 26/159 (16%) | |
| hOBFC1_like | 65..165 | CDD:239929 | 13/99 (13%) | ||
| STN1_2 | 167..374 | CDD:286279 | 24/127 (19%) | ||
| Winged helix-turn-helix (wHTH) 1. /evidence=ECO:0000250 | 201..304 | 17/93 (18%) | |||
| Winged helix-turn-helix (wHTH) 1. /evidence=ECO:0000250 | 305..408 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5235 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||