Sequence 1: | NP_001260652.1 | Gene: | RPA2 / 35364 | FlyBaseID: | FBgn0032906 | Length: | 246 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_780569.1 | Gene: | Stn1 / 108689 | MGIID: | 1915581 | Length: | 378 | Species: | Mus musculus |
Alignment Length: | 270 | Identity: | 50/270 - (18%) |
---|---|---|---|
Similarity: | 97/270 - (35%) | Gaps: | 54/270 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 LVVKQIVDAPE-----GNIELFGMQYAMACVVAIVRNVETSSTKITYTLEDHSGRIDAHYW--LE 87
Fly 88 EGDALKAPEVM--------------------------VNNYVKVYGTTRSQGGSKTLMIFKLLPV 126
Fly 127 LDP--NEVCTHLLEVLNARYRAEDYQSKGGAGAGAGASSGSGS--IADFTASQSSAIVSGL-EPK 186
Fly 187 QQAVFQ-------AIKSNVS-----EEGISRKELK-AKFSHISDSELTNILDFMISEGHIY---S 235
Fly 236 SIDADHFICT 245 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RPA2 | NP_001260652.1 | RFA2 | 12..246 | CDD:227560 | 50/270 (19%) |
RPA2_DBD_D | 52..144 | CDD:239924 | 19/121 (16%) | ||
RPA_C | <182..238 | CDD:285937 | 16/72 (22%) | ||
Stn1 | NP_780569.1 | Interaction with CTC1. /evidence=ECO:0000250|UniProtKB:Q9H668 | 8..195 | 26/158 (16%) | |
hOBFC1_like | 65..165 | CDD:239929 | 13/99 (13%) | ||
STN1_2 | 167..343 | CDD:370338 | 30/139 (22%) | ||
Winged helix-turn-helix (wHTH) 1. /evidence=ECO:0000250 | 201..305 | 22/103 (21%) | |||
Winged helix-turn-helix (wHTH) 2. /evidence=ECO:0000250 | 306..378 | 50/270 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5235 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |