DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sky and AT2G05590

DIOPT Version :9

Sequence 1:NP_001260649.1 Gene:sky / 35359 FlyBaseID:FBgn0032901 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_849938.1 Gene:AT2G05590 / 815108 AraportID:AT2G05590 Length:303 Species:Arabidopsis thaliana


Alignment Length:317 Identity:72/317 - (22%)
Similarity:133/317 - (41%) Gaps:62/317 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 LHAAFSIRGLSTQYISRIFIKTEMLLKS---------RSVLTSGSKQLIKSRSSDNLPTSQSQVN 383
            :||   ::...:|.:|.:|..:.....|         ::.|.|...:.:.|..|..:|.|.::.:
plant     1 MHA---LKDKVSQKLSNLFADSPSQSASPRYSNSDSPKARLNSSVGKSLSSYFSFVVPQSGNEED 62

  Fly   384 IQMMSHTLTIREKLHS--ESCRNLGEKSPGHRAIAMGVYPIHNLKSQACKNE------------- 433
            .::.. .|.||.:.:.  |:|::...::.....|::|......|:..|...|             
plant    63 SELCP-PLPIRTESYECIENCKSANGQAKAGTFISIGEDKDCELRVSAKVEESGNDYFDGVKKMR 126

  Fly   434 -----------DLFT-LWSWLPVRITMYQPVLLYTTEEHGCSLTTFYVRV-EQHEPTLLMIKTCN 485
                       :||. |.:.||..:...:.:|||:|.:||.||.|...|. |...|.||:.....
plant   127 ELTESSVFITANLFEFLHASLPNIVRGCKWILLYSTLKHGISLRTLLRRSGELPGPCLLVAGDKQ 191

  Fly   486 NEVFGAY--CSSRWFERNVKDDKGQRQAYFGTGETFLF-SLYPERAKYPWVGIEGDKDLGHSSEL 547
            ..||||.  |..:         ...::.|.||.:|||| ::|.|...:...|         ::..
plant   192 GAVFGALLECPLQ---------PTPKRKYQGTSQTFLFTTIYGEPRIFRPTG---------ANRY 238

  Fly   548 FMAADSKMITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLEVYGF 604
            ::...::.:..|||...|:.:||::....:...:||.|..|..|.:||::.:|::||
plant   239 YLMCMNEFLAFGGGGNFALCLDEDLLKATSGPSETFGNECLASSTEFELKNVELWGF 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
skyNP_001260649.1 RabGAP-TBC 82..293 CDD:382990
TLDc 431..605 CDD:214733 51/203 (25%)
AT2G05590NP_849938.1 TLDc 135..296 CDD:214733 50/179 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.