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Protein Alignment sky and Tldc2
DIOPT Version :9
Sequence 1: | NP_001260649.1 |
Gene: | sky / 35359 |
FlyBaseID: | FBgn0032901 |
Length: | 607 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038962640.1 |
Gene: | Tldc2 / 502689 |
RGDID: | 1561343 |
Length: | 217 |
Species: | Rattus norvegicus |
Alignment Length: | 166 |
Identity: | 48/166 - (28%) |
Similarity: | 78/166 - (46%) |
Gaps: | 33/166 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 427 SQACKNEDLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYVRVEQHE-PTLLMIKTCNNEVFG 490
||.....::..|...||.|:|.:...|::.|...|.||...|.::|.|. |.||:::..:.::||
Rat 48 SQVLGASEIKQLSLHLPPRVTGHPWNLIFCTSRDGFSLQRLYRQMEGHSGPVLLLLRDQDGQMFG 112
Fly 491 AYCSSRWFERNVKDDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMAADSKM 555
|:.||. ::..|| ::|||||||||..|:...:.|. ||:| .|:..|...
Rat 113 AFSSSA-----LRLSKG----FYGTGETFLFSFSPQLKVFKWT--------GHNS-FFVKGDLDS 159
Fly 556 ITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPS 591
:.:|.|...:: |..::.:| |||
Rat 160 LMMGSGRCVSL------------SPTSWGSP--CPS 181
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sky | NP_001260649.1 |
RabGAP-TBC |
82..293 |
CDD:382990 |
|
TLDc |
431..605 |
CDD:214733 |
46/162 (28%) |
Tldc2 | XP_038962640.1 |
TLDc |
48..>165 |
CDD:214733 |
42/134 (31%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5142 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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