DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sky and Ncoa7

DIOPT Version :9

Sequence 1:NP_001260649.1 Gene:sky / 35359 FlyBaseID:FBgn0032901 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_011241455.1 Gene:Ncoa7 / 211329 MGIID:2444847 Length:953 Species:Mus musculus


Alignment Length:622 Identity:132/622 - (21%)
Similarity:223/622 - (35%) Gaps:183/622 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DASSQADKLSGIVE---ESDLYEGFAPHVETSEIKTLDFYNLPKQTGKEPALRSYTEIQQLLQQG 69
            |.:.:.||.||..|   ||.|    ..|.:..:||.::||           |....|..|||:..
Mouse   489 DEAPEVDKHSGSPENLGESTL----NIHEDLDKIKLIEFY-----------LNKNKEGSQLLENV 538

  Fly    70 KKRDVKNILRENSWP--INSPIRAQLWPMLCGQHQTKQQMLDGFYWEMVHQVFGTTELSEKPIML 132
            :|.::.:  |::..|  |:..:.:.| |. .|....:.....|..|                   
Mouse   539 QKSELSD--RKSIEPGGIDITLSSSL-PQ-AGDSPPEDNKEPGTLW------------------- 580

  Fly   133 PAFVDATHCLPYHLTSTGRAVA---DRIVNVLGYDCPDITYSPVLYPITSILLHFMSEEE----- 189
               |.....||..|..:.....   ..:::.||.....:.:|..:...:.|.|..:...:     
Mouse   581 ---VKGGETLPLKLDPSAEETVINNKEVLDSLGSSLDKMCHSAQMDNKSEIQLWLLKRIQVPIEG 642

  Fly   190 ---AYICLAGLVGSKEK------VFINQTKLQHEVTWKTVMQIAKKHTKSATSYFQRICPGLKLE 245
               |:.|.:.::.|||:      :|:             .:::.|...||..|:...:.......
Mouse   643 LRIAFFCDSDILPSKEEKSKTPPMFL-------------CIKVGKPMRKSFASHTATMVQQYSKR 694

  Fly   246 RIFMDWCWWILAGLPFQHLVRIMDCYFHEGIKVLYRVALVILNLFHKECQSNNEWSPDNIKNDIG 310
            |...:: |:.:.               .|.:..||...:              :||||       
Mouse   695 RKQPEY-WFAVP---------------RERVDHLYTFFV--------------QWSPD------- 722

  Fly   311 NALIKFCKKIPVSPAKLLHAAFSIRGLSTQYISRIFIKTEMLLKSRSVLTSGSKQLIKSRSSDNL 375
                                   :.|...:....:.::.|.|            .:|.:..|:  
Mouse   723 -----------------------VYGKDAKEQGFVVVEKEEL------------NMIDNFFSE-- 750

  Fly   376 PTSQSQVNIQMMSHTLTIRE-KLHSESCRNLGEKSPGHRAIAMGVYPIHNLKSQACKNEDLFTLW 439
            ||::|.       ..:|:.| |....:|....|:......:     ||....|...:|..:..|.
Mouse   751 PTTKSW-------EIITVEEAKRRKSTCSYYEEEEEEEEGL-----PILQPHSALLENMHIEQLA 803

  Fly   440 SWLPVRITMYQPVLLYTTEEHGCSLTTFYVR-VEQHEPTLLMIKTCNNEVFGAYCSSRWFERNVK 503
            ..||.|:..|...|.|:|.|||.||.|.|.: .....|.||:||..:|::||||.:..:   ...
Mouse   804 RRLPARVQGYPWRLAYSTLEHGTSLKTLYRKSASLDSPVLLVIKDMDNQIFGAYATHPF---KFS 865

  Fly   504 DDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMAADSKMITIGGGEGQ-AIW 567
            |.      |:|||||||::..|....:.|.|         .:..|:..|...:.:|||.|: .:|
Mouse   866 DH------YYGTGETFLYTFSPNFKVFKWSG---------ENSYFINGDISSLELGGGGGRFGLW 915

  Fly   568 MDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLEVYGF 604
            :|.::..|:::||.||||..|....||.::.|||:.|
Mouse   916 LDADLYHGRSNSCSTFNNDILSKKEDFIVQDLEVWTF 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
skyNP_001260649.1 RabGAP-TBC 82..293 CDD:382990 31/229 (14%)
TLDc 431..605 CDD:214733 60/176 (34%)
Ncoa7XP_011241455.1 LysM 119..161 CDD:366664
TLDc 791..953 CDD:214733 61/180 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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