DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sky and Oxr1

DIOPT Version :9

Sequence 1:NP_001260649.1 Gene:sky / 35359 FlyBaseID:FBgn0032901 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_036015097.1 Gene:Oxr1 / 170719 MGIID:2179326 Length:879 Species:Mus musculus


Alignment Length:639 Identity:147/639 - (23%)
Similarity:227/639 - (35%) Gaps:227/639 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RGGD-ASSQADKLSGIVEESDLYEG----FAPHVETSEIKTLDFYNLPKQTGKEPALRSYT-EIQ 63
            :||| |:....::||..|:|...:|    .:.|.|:|         |.::.|::......| |::
Mouse   428 KGGDKATESLQEVSGPKEQSTEVKGQDNQDSSHQESS---------LQQEAGEDSVSSGETVELK 483

  Fly    64 Q---LL--QQGK--KRDVKNILRE--NSWPINSPIRAQLWPMLCGQHQTKQQMLDGFYWEMVHQV 119
            :   :|  |||:  |||.:..:.|  ..|..:|            ..|.|||.      :.:.||
Mouse   484 EKPAVLKDQQGQELKRDSETEVEELRKLWKTHS------------MQQAKQQR------DTIQQV 530

  Fly   120 FGTTELSEKPIMLPAFVDATHCLPYHLTSTGRAVADRIVNVLGYDCPDITYSPVLYPITSILLHF 184
                  |::        ::.|         ..|.||  .:..|        |.:|.......|| 
Mouse   531 ------SQR--------ESKH---------SSAAAD--AHGEG--------SSLLKEKRRHRLH- 561

  Fly   185 MSEEEAYICLAGLVGS-KEKVFINQTKLQHEVTWKTVMQIAKKHTKSATSYFQRICPGLKLERIF 248
                 .::||.  ||. ..|.|::|.    ..|.:...|..|||     .|              
Mouse   562 -----KFLCLR--VGKPMRKTFVSQA----SATMQQYAQRDKKH-----EY-------------- 596

  Fly   249 MDWCWWILAGLPFQHLVRIMDCYFHEGIKVLYRVALVILNLFHKECQSNNEWSPDNIKNDIGN-- 311
                |:.:......||                 .|..|            :|||:....|.|.  
Mouse   597 ----WFAVPQERTDHL-----------------YAFFI------------QWSPEIYAEDSGEYT 628

  Fly   312 -----ALIKFCKKIPVSPAKLLHAA------FSIRGLSTQYISRI-FIKTEML--LKSRSVLTS- 361
                 .::|...:...:.|....||      .|:    .:|..|| .:.||.|  |..|..:|: 
Mouse   629 REPGFIVVKKMDESEANEAPAGEAAAREWEVVSV----AEYHRRIDALNTEELRTLCRRLQITTR 689

  Fly   362 ---GSKQLIKSRSSDNLPTSQSQVNIQMMSHTLTIREKLHSESCR-NLGEKSPGHRAIAMGVYPI 422
               .|||:..:::.                        |..||.| ||.:               
Mouse   690 EDINSKQVAPAKAD------------------------LEPESFRPNLSD--------------- 715

  Fly   423 HNLKSQACKNEDLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFY-VRVEQHEPTLLMIKTCNN 486
               .|:....:.:..|...||.|...|...|:|.|.:||.||.|.| .......|.|::||..:.
Mouse   716 ---PSELLLPDQIEKLTKHLPPRTIGYPWTLVYGTGKHGTSLKTLYRTMTGLDTPVLMVIKDSDG 777

  Fly   487 EVFGAYCSSRWFERNVKDDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMAA 551
            :||||..|..:   .|.|      .::||||||:|:..||...:.|.|         .:..|:..
Mouse   778 QVFGALASEPF---KVSD------GFYGTGETFVFTFCPEFEVFKWTG---------DNMFFIKG 824

  Fly   552 DSKMITIGGGEGQ-AIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLEVYGF 604
            |...:..|||.|: |:|:|.::..|::.|||||.|..|....||.|:.:|::.|
Mouse   825 DMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKKEDFFIQDIEIWAF 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
skyNP_001260649.1 RabGAP-TBC 82..293 CDD:382990 36/211 (17%)
TLDc 431..605 CDD:214733 58/176 (33%)
Oxr1XP_036015097.1 LysM 113..155 CDD:396179
MDN1 <278..562 CDD:227596 42/199 (21%)
TLDc 717..879 CDD:214733 59/180 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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