DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sky and kdm3a

DIOPT Version :10

Sequence 1:NP_001260649.1 Gene:sky / 35359 FlyBaseID:FBgn0032901 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_002937329.2 Gene:kdm3a / 100379807 XenbaseID:XB-GENE-1012801 Length:1336 Species:Xenopus tropicalis


Alignment Length:515 Identity:101/515 - (19%)
Similarity:158/515 - (30%) Gaps:195/515 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 CPDITYSPVL----YPITSILLHFMSEEEAYICLAGLVGSKEKVFINQTKLQ---HEVTWKTVMQ 222
            ||.:.|..::    .|:|             |||. .:|.||||||::..:|   ...|.|..||
 Frog   105 CPAMVYKVLVGKFSLPLT-------------ICLQ-FLGDKEKVFISKELVQPVRDRETLKQFMQ 155

  Fly   223 IAKKHTKSATSYFQRICPGLKLERIFMDWCWWILAGLPFQHLVRIMDCYFHEGI---KVLYRVAL 284
            ..|...|:                              ||.|:|       :.:   ::|.....
 Frog   156 ENKTFNKA------------------------------FQELIR-------KNVDESRLLQAARN 183

  Fly   285 VI---LNLFHKECQSNNEWSPDNIKN--DIGNALIKFCKKIP----VSPAKLLHAAFSIRGLSTQ 340
            .|   :|::..:  .:.:|....|.|  ....||...|:::|    :.|| |||.          
 Frog   184 TIGMPINVYSMD--PSMQWFSGTITNVRTASRALEINCEQLPSLKIIDPA-LLHV---------- 235

  Fly   341 YISRIFIKTEMLLKSRSVLTSGSK--QLIKSRSSDNLPTSQSQVNIQMMSHTLTIREKLHSESCR 403
                      :|:.:...:...||  :..|.::.|.....|::|                 :..|
 Frog   236 ----------VLVHNYGDINEKSKKPRAPKRKTQDAEAEDQTEV-----------------KQTR 273

  Fly   404 NLGEKSPG------------HRAIAMGVYPIHNLKSQACKNEDLFTLWSWLPVRITMYQPVLLYT 456
            |  |:.||            .|.....:..:.|.|:.|.      .|:::|       .|    |
 Frog   274 N--EEVPGKDVTQKTSFLTYRRDDGKTLVVVDNPKATAT------NLFNYL-------NP----T 319

  Fly   457 TEEH----------------------GCSLTTFYVRVEQHEPTLLMIKTCNNEVFGAYCSSRWFE 499
            |||.                      ||:.||..::.....|     :..:...|||........
 Frog   320 TEEQQKVQQSLSSKQSVPVGFGEALLGCAATTPGIQNAATPP-----QANSPPSFGAATPQGKGT 379

  Fly   500 RNVKDDKGQRQAYFGTGETFLF---------------------SLYPERAKYP-WVGI-EGDKDL 541
            :|:..|...........||.||                     |.:...:..| |.|. :...|.
 Frog   380 QNLPGDTTVLNGDSKREETNLFLSAAASQGNKRSLGFGMMESPSTFSSVSAMPSWSGSGQAKSDN 444

  Fly   542 GHSSE-LFMAADSKMITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLE 600
            |..|| ||.|.....:...|.|.......|......|||.|| :.|.:|.....|.:|::
 Frog   445 GPKSENLFTAFTKSTVFPKGFEFSVKSFPEQKMLSVTDSPKT-SPPKVCVQQQQEQKVVK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
skyNP_001260649.1 TBC 82..293 CDD:214540 29/140 (21%)
TLDc 431..605 CDD:214733 44/216 (20%)
kdm3aXP_002937329.2 C1_2 <686..711 CDD:427141
JmjC 1077..1149 CDD:214721
cupin_RmlC-like 1166..1279 CDD:477354
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.