DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9338 and rtv

DIOPT Version :10

Sequence 1:NP_610071.1 Gene:CG9338 / 35357 FlyBaseID:FBgn0032899 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_572693.1 Gene:rtv / 32056 FlyBaseID:FBgn0261277 Length:151 Species:Drosophila melanogaster


Alignment Length:160 Identity:32/160 - (20%)
Similarity:49/160 - (30%) Gaps:59/160 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MILALTVLATVACTGYAIKCYQCDS--------------LTNSE--------------CGKDIKS 43
            ::..:.:::.|:..|...:||||.|              .|:.|              |||.|:.
  Fly     7 LLAVIFLISLVSIDGLLRRCYQCRSRGELGSCKDPFTFNATDVEQEPGVAAIPCASGWCGKVIEG 71

  Fly    44 DSSLVLDCTKMAPPRFLQNFFPVRNATGCMKQTIDIPGNPQIVRSCYFGNIADTKVGCQTDPSLT 108
            ..:..:|...:|..|......|..|...|                      |||        ...
  Fly    72 GGTYAIDDYDLAIQRMCVQRGPDDNMDRC----------------------ADT--------IYN 106

  Fly   109 INKLLSCEVCTEDECNGTSSLAPIAGVILL 138
            ..|:..| .|..|.|||..|.:....:||:
  Fly   107 YKKVYMC-FCQGDLCNGARSWSSAPQMILI 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9338NP_610071.1 TFP 23..125 CDD:480272 25/129 (19%)
rtvNP_572693.1 TFP_LU_ECD_Rtv 23..123 CDD:467118 26/130 (20%)

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