DRSC/TRiP Functional Genomics Resources

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Protein Alignment bero and qvr

DIOPT Version :10

Sequence 1:NP_610069.2 Gene:bero / 35355 FlyBaseID:FBgn0032897 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001137646.1 Gene:qvr / 2768718 FlyBaseID:FBgn0260499 Length:158 Species:Drosophila melanogaster


Alignment Length:144 Identity:36/144 - (25%)
Similarity:51/144 - (35%) Gaps:38/144 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLACSAYAIKCYQCESLTMPKCGLKFEADETLLLDCSRIGPPRYLQNFFPLRNATGCMKKTLESV 80
            |..|...:|.||:|:|.|..:|  |...:.|.|        ||   :..||....||..|.:...
  Fly    31 SAECQTRSIYCYECDSWTDARC--KDPFNYTAL--------PR---DQPPLMTCNGCCVKMVRHQ 82

  Fly    81 AGHPQIVRSCYFGDIN----NIQAGCQSDPS----MPFVKQLGCDVCTKDECNGSSS-------- 129
            ....::||......:.    .:...|..:.|    |.|        |.:|.||.|.:        
  Fly    83 RSPYEVVRRMCTSQLQINLFMVDHVCMMESSGNGHMCF--------CEEDMCNSSKNLHTNGCQL 139

  Fly   130 -LAPIAGAILLFFG 142
             |.|||.|:....|
  Fly   140 HLIPIAVAVSWLMG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beroNP_610069.2 TFP 23..127 CDD:480272 27/111 (24%)
qvrNP_001137646.1 TFP_LU_ECD_Qvr 37..127 CDD:467124 25/110 (23%)

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