DRSC/TRiP Functional Genomics Resources

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Protein Alignment twit and rtv

DIOPT Version :10

Sequence 1:NP_610067.1 Gene:twit / 35353 FlyBaseID:FBgn0032895 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_572693.1 Gene:rtv / 32056 FlyBaseID:FBgn0261277 Length:151 Species:Drosophila melanogaster


Alignment Length:139 Identity:34/139 - (24%)
Similarity:60/139 - (43%) Gaps:25/139 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QCWHCSSDTIGAEDFCDVTFQEDNIPTDLIKERNINLLRSCNGTINSDHERAVCRKTVEE----- 94
            :|:.|.|.  |....|...|..:  .||:.:|..:..:...:|.         |.|.:|.     
  Fly    25 RCYQCRSR--GELGSCKDPFTFN--ATDVEQEPGVAAIPCASGW---------CGKVIEGGGTYA 76

  Fly    95 -NNGKLITKRFCYYTNKSDPVELCNITSPEKNVRRIFCEDCLTDRCNGALAGASILEMLL--LLP 156
             ::..|..:|.|......|.::.|..|.  .|.::::...|..|.||||.:.:|..:|:|  :||
  Fly    77 IDDYDLAIQRMCVQRGPDDNMDRCADTI--YNYKKVYMCFCQGDLCNGARSWSSAPQMILITMLP 139

  Fly   157 IAG--LIQQ 163
            :.|  |:|:
  Fly   140 LLGSWLLQR 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twitNP_610067.1 TFP_LU_ECD_Twit 33..142 CDD:467122 24/112 (21%)
rtvNP_572693.1 TFP_LU_ECD_Rtv 23..123 CDD:467118 24/112 (21%)

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