DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp11b3 and Cyp12d1-d

DIOPT Version :9

Sequence 1:NP_861545.1 Gene:Cyp11b3 / 353498 RGDID:727886 Length:498 Species:Rattus norvegicus
Sequence 2:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster


Alignment Length:523 Identity:124/523 - (23%)
Similarity:225/523 - (43%) Gaps:92/523 - (17%)


- Green bases have known domain annotations that are detailed below.


  Rat    25 STATQAPKTLKPFEAIPQYSRNKWLKMIQILREQSQENLHLEMHQAFQELGPIFRHSA--GGAQI 87
            |:.|:..||   ::.||:.::.|:::......|....::........:..|.|:....  |....
  Fly    33 SSITEEHKT---YDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDW 94

  Rat    88 VSVMLPEDAEKLHQVESILPRRMTLESWVAHRE-----LRGLRRGVFLLNGADWRFNRLQLNPNM 147
            |:....:|.|.:.:.|.|.|||..|:|.|..||     :.|..:|:.......|...|..:||..
  Fly    95 VTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIF 159

  Rat   148 LSPKAVQSFVPFVDVVARDFVENLKKRMLENVHGSMSMDIQSNVFNYTMEASHFVISGERLGLTG 212
            :.|:.::.:...:..:..:|:|.:|:     :....::::..   ::|.|.|..|.  |.|||..
  Fly   160 MQPRGLRMYYEPLSNINNEFIERIKE-----IRDPKTLEVPE---DFTDEISRLVF--ESLGLVA 214

  Rat   213 HDL----------NPESLKFIHALHSMFKSTTQLMFLPKNLTRWTSTQVWKGHFESWDIISEYVT 267
            .|.          |.::|........:|:.|.:|...|                ..|.|||    
  Fly   215 FDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQP----------------SMWKIIS---- 259

  Rat   268 KCIKNVYRELAEGRQQSWSVISEMVAQSTLSM-------DAIHANSM-----------------E 308
               ...||::......|.:|..:|:.::..::       :.|::|||                 :
  Fly   260 ---TPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLD 321

  Rat   309 LIAGSVDTTAISLVMTLFELARNPDVQQALRQESLA---AEASIAANPQKAMSDLPLLRAALKET 370
            ::...||.||..|...|..|:::||.|..||:|.|:   .:.|:.  .::.|.|:|.|||.:|||
  Fly   322 ILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLL--NEENMKDMPYLRAVIKET 384

  Rat   371 LRLYPIGSSLERIVDSDLVLQNYHVPAGTLVIIYLYSMGRNPAVFPRPERYMPQRWLERKRS--- 432
            ||.||.|....|...:|::|..|.||.||.|::....:.:....:|||:.::|:|||....:   
  Fly   385 LRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKK 449

  Rat   433 -----FQHLAFGFGVRQCLGRRLAEVEVLLLLHHMLKIFQVETLRQEDVQMAYRFVLMPNPRLVL 492
                 |..|.||||.|.|:|:|:.::|:...:..:::.|.||..|  |....::.:.:..|.:..
  Fly   450 MQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNR--DASRPFKTMFLMEPAITF 512

  Rat   493 TIR 495
            ..:
  Fly   513 PFK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp11b3NP_861545.1 p450 41..494 CDD:278495 119/504 (24%)
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 115/474 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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