DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31673 and grhpra

DIOPT Version :9

Sequence 1:NP_724294.1 Gene:CG31673 / 35348 FlyBaseID:FBgn0051673 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001018361.1 Gene:grhpra / 497183 ZFINID:ZDB-GENE-040724-230 Length:327 Species:Danio rerio


Alignment Length:324 Identity:122/324 - (37%)
Similarity:188/324 - (58%) Gaps:11/324 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATRAFKVLISHPNVPAPALELLRSRGAETIIC------QSVPPSRDEILQKVPGVDAIYWAHYQP 62
            |.:..||.::. .:|...:::|:    :..:|      ...|..|.|:|:.|.|...:.......
Zfish     3 AHQMLKVFVTR-RIPQEGMKILQ----KASMCDLSLWDSDEPVPRAELLKGVAGAHGLICLLSDK 62

  Fly    63 LNAGILDAAGSQLRCVSTMSSGIDFVDIPEFQKRGIPLGHTPGVVKNAVADLAIGLMIAAGRHFH 127
            ::..:|||||..|:.:||:|.|.|.:.|.|.:||||.:|:||.|:.:|.|:|.:.|::|..|...
Zfish    63 IDTEVLDAAGPNLKVISTLSVGFDHLAIDEIKKRGIRVGYTPDVLTDATAELTVALLLATARRLP 127

  Fly   128 AGRTEIERSQWKIEQINWMMGQEIRDSVIGFFGFGGISQAIAKRLQCWDVAKIIYHTRTRKENDG 192
            .|..|::...|...:..|:.|..:..|.:|..|.|.|..|||:||:.:.|.|::|..|..|....
Zfish   128 EGVEEVKNGGWSTWKPLWLCGYGLSGSTVGVIGLGRIGLAIARRLKPFGVKKLLYTGRKPKPEAE 192

  Fly   193 DFKAEHVSFEQLLQESDFLVVAAPLTNETREKFNGKAFNLMKRSSVFVNVARGGLVNQTDLHDAL 257
            :...|:|..:.|::||||:||:..||.:|:...:...|..||::|||:|.:||.:|||.||.:||
Zfish   193 EVDGEYVPLDTLVRESDFVVVSCSLTPDTQGLCDKTFFGKMKKTSVFINTSRGAVVNQEDLFEAL 257

  Fly   258 TNGTISAAGLDVTTPEPLPANSPLLNVPNCVILPHMGTQTMKTTIEMGLLAANNILNAIEGKPM 321
            ::|.|:|||||||:|||||.|.|||.:.|||:|||:|:.|..|...|..|.|||:|..:.|..|
Zfish   258 SSGQIAAAGLDVTSPEPLPTNHPLLTLKNCVVLPHIGSATYSTRGVMSELTANNLLAGLTGSEM 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31673NP_724294.1 LdhA 9..320 CDD:223980 120/316 (38%)
GDH 9..318 CDD:240626 119/314 (38%)
grhpraNP_001018361.1 LdhA 8..326 CDD:223980 121/319 (38%)
GDH 8..318 CDD:240626 119/314 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574174
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53501
OrthoDB 1 1.010 - - D1378766at2759
OrthoFinder 1 1.000 - - FOG0000836
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100397
Panther 1 1.100 - - O PTHR10996
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X646
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.720

Return to query results.
Submit another query.