DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31673 and CG1236

DIOPT Version :9

Sequence 1:NP_724294.1 Gene:CG31673 / 35348 FlyBaseID:FBgn0051673 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster


Alignment Length:321 Identity:134/321 - (41%)
Similarity:193/321 - (60%) Gaps:1/321 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RATRAFKVLISHPNVPAPALELLRSRGAETIICQSVPPSRDEILQKVPGVDAIYWAHYQPLNAGI 67
            |.:...||.::.|:|....|||||.....:...::.|..|.|:::.|.|.||:|.|....::..:
  Fly    22 RMSSQHKVYVTRPDVDDSGLELLRKSCQVSTWHETNPVPRSELIRVVAGKDALYCALTDKVDKEV 86

  Fly    68 LDAAGSQLRCVSTMSSGIDFVDIPEFQKRGIPLGHTPGVVKNAVADLAIGLMIAAGRHFHAGRTE 132
            |||||.||:||:|:|.|.|.:|:.|.:||||.:|.||.|:.:|.|:|.:.|::|..|.......:
  Fly    87 LDAAGPQLKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRRLFEANKQ 151

  Fly   133 IERSQWKIEQINWMMGQEIRDSVIGFFGFGGISQAIAKRLQCWDVAKIIYHTRT-RKENDGDFKA 196
            :....||.....||.||.::.|.:|..|||.|.|.||.|:..:...:|.|.||: |.:......|
  Fly   152 VYNGGWKSWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVPFKPTEITYTTRSLRPKEAAAVNA 216

  Fly   197 EHVSFEQLLQESDFLVVAAPLTNETREKFNGKAFNLMKRSSVFVNVARGGLVNQTDLHDALTNGT 261
            .||.|:::|:|||.:||...||.||:|.||..||..||.:.:.:|.||||:|:|..|::||....
  Fly   217 RHVDFDEMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCILINTARGGVVDQKALYEALKTKR 281

  Fly   262 ISAAGLDVTTPEPLPANSPLLNVPNCVILPHMGTQTMKTTIEMGLLAANNILNAIEGKPMI 322
            |.|||||||||||||.:.|||.:.|.|||||:|:..::|..||..:.|.|||.|:.|..|:
  Fly   282 ILAAGLDVTTPEPLPIDDPLLKLDNVVILPHIGSADIETRKEMSRITARNILAALAGDKMV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31673NP_724294.1 LdhA 9..320 CDD:223980 132/311 (42%)
GDH 9..318 CDD:240626 131/309 (42%)
CG1236NP_649579.2 GDH 27..338 CDD:240626 131/310 (42%)
LdhA 27..338 CDD:223980 131/310 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438682
Domainoid 1 1.000 161 1.000 Domainoid score I1256
eggNOG 1 0.900 - - E1_COG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1624
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113526at50557
OrthoFinder 1 1.000 - - FOG0000836
OrthoInspector 1 1.000 - - otm51324
orthoMCL 1 0.900 - - OOG6_100397
Panther 1 1.100 - - P PTHR10996
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X646
1110.800

Return to query results.
Submit another query.