DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vari and MAPKKK7

DIOPT Version :9

Sequence 1:NP_724288.3 Gene:vari / 35343 FlyBaseID:FBgn0250785 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_187962.1 Gene:MAPKKK7 / 820555 AraportID:AT3G13530 Length:1368 Species:Arabidopsis thaliana


Alignment Length:601 Identity:118/601 - (19%)
Similarity:214/601 - (35%) Gaps:171/601 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 QPVP-LFLPAHLNNKPICD-------DIIRKFSPSRRLESRELAKLLAQPHFRALLRA------H 125
            ||:| ||.....:|.||.|       |.:|:.......:..:...||:.|..|...||      |
plant   223 QPMPALFRIVQDDNPPIPDSLSPDITDFLRQCFKKDSRQRPDAKTLLSHPWIRNSRRALQSSLRH 287

  Fly   126 DEIGAL-YEQRLKAAG-----GSTSQLEIASQRQTGGYLFTEDVLNTKMPVETIKMVGLRRDPSK 184
            .  |.: |.:...|:.     ||....|..|....|   .::....:|:|:..:......:|.|.
plant   288 S--GTIKYMKEATASSEKDDEGSQDAAESLSGENVG---ISKTDSKSKLPLVGVSSFRSEKDQST 347

  Fly   185 PLGLTVE-LDEFKQLVVARILAGGVIDKQSMLHVGDVILEVNGTPV------------RTPDELQ 236
            |..|..| .|..:..:::        |:...|.:.:...:..|||.            .||:.|.
plant   348 PSDLGEEGTDNSEDDIMS--------DQVPTLSIHEKSSDAKGTPQDVSDFHGKSERGETPENLV 404

  Fly   237 VEVSRAKENLTL--KIGPNVDEEIKSGRYTVSGGQVKQNGI-ASLETGKKLTCYMRALFTYNPSE 298
            .|.|.|::|.:.  .:|..:...:....::. |.:.::.|| .:::|...::....|.|:..|.:
plant   405 TETSEARKNTSAIKHVGKELSIPVDQTSHSF-GRKGEERGIRKAVKTPSSVSGNELARFSDPPGD 468

  Fly   299 DSLLPCRDI---------GLPFKSGDILQIINVKDPNWWQAKNITAESDKIGLIPSQELEERRKA 354
            .||   .|:         |.|.::...:...||.     |..:..|:..|      .:|..:.:|
plant   469 ASL---HDLFHPLDKVSEGKPNEASTSMPTSNVN-----QGDSPVADGGK------NDLATKLRA 519

  Fly   355 FVAPEADYVHKIGICGTRISKRKRKTMYRSVANCEFDKAELLLYEEVTRMPPFRRKTLVLIGVSG 419
            .:|                    :|.|.....:.. |..:|           ||    :::||  
plant   520 TIA--------------------QKQMEGETGHSN-DGGDL-----------FR----LMMGV-- 546

  Fly   420 VGRRTLKNRLINSDVDKFGAVIPHTSR-PKRALEENG--SSYWFMDREEMEEAV----------- 470
                 ||:.:|:.|...|...:|..:. |.:|:|.:.  ||   :..:|.|:|:           
plant   547 -----LKDDVIDIDGLVFDEKVPAENLFPLQAVEFSRLVSS---LRPDESEDAIVSSCQKLVAMF 603

  Fly   471 --RNNEFLEYGEHNGNLYGTHLQSIKDVINSGRMC-ILDCAPNALKILHNSQE------LMPFVI 526
              |..:.:.:...:|.|   .|..:.|:..|..:| :|......:|...:.||      |:|.|:
plant   604 RQRPEQKVVFVTQHGFL---PLMDLLDIPKSRVICAVLQLINEIIKDNTDFQENACLVGLIPVVM 665

  Fly   527 FVAAPGMEQLKTIYADRRATGSNRNLSFDRQSSIRFSSRRAR----TLESLASLYEDDDLVATVE 587
            ..|.|..::.:.|                |:.:..|..:..:    ||:...:......||    
plant   666 SFAGPERDRSREI----------------RKEAAYFLQQLCQSSPLTLQMFIACRGIPVLV---- 710

  Fly   588 ESSFVQRKYEKYFDMV 603
              .|::..|.||.:||
plant   711 --GFLEADYAKYREMV 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
variNP_724288.3 L27 <105..128 CDD:280918 7/28 (25%)
PDZ_signaling 173..250 CDD:238492 18/91 (20%)
SH3_MPP 287..347 CDD:212796 13/68 (19%)
Guanylate_kin 408..622 CDD:279019 46/223 (21%)
GuKc 418..622 CDD:214504 43/213 (20%)
MAPKKK7NP_187962.1 STKc_Cdc7_like 19..274 CDD:270797 14/50 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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