DRSC/TRiP Functional Genomics Resources

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Protein Alignment vari and dlg5a

DIOPT Version :9

Sequence 1:NP_724288.3 Gene:vari / 35343 FlyBaseID:FBgn0250785 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_005156738.1 Gene:dlg5a / 569065 ZFINID:ZDB-GENE-030131-3149 Length:1961 Species:Danio rerio


Alignment Length:583 Identity:121/583 - (20%)
Similarity:215/583 - (36%) Gaps:159/583 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 IGALYEQRLKAAGG---STSQLEIASQRQT--GGYLFTEDVLNT--------------------- 166
            |.|.|...:...|.   |:|:||..|.:.|  |....|.|..:|                     
Zfish  1457 IMAQYNPHMYQLGNHSRSSSRLEPVSTQSTPQGSGTATPDNHSTIDTLSEQDEGTLTPSSKQTTP 1521

  Fly   167 --------KMPVETIK------MVGLRRDPSKPLGLTVELDEFKQLVVARILAGGVIDKQSMLHV 217
                    :||.|:.|      :|.:|:...: ||:.:.....:.:.|.|:...........:..
Zfish  1522 TTSPNSFIRMPSESSKKVPEARLVTVRKTQVE-LGIQLCGGNLRGIFVERLEDDSPARGADAVVP 1585

  Fly   218 GDVILEVNGTPV--RTPDELQVEVSRAKENLTLKIGPNVDE--EIKSGRYTVSGGQVKQNGIASL 278
            ||:|||.....:  :|.:|..:|:.:..|.:||::...:||  ::|.   |...|          
Zfish  1586 GDMILEYGSVNMKNKTVEEAYLEMLKPAETVTLRVQHRLDEFNQVKG---TPGDG---------- 1637

  Fly   279 ETGKKLTCYMRALFTYNPSEDSLLPCRDIGLPFKSGDILQIINVKDPN----WWQAKNITAESDK 339
                   .|:|||:      |.:.. .::.|.||..|||.:.:.. ||    .|.|..:...:.|
Zfish  1638 -------FYIRALY------DRVAE-TELDLSFKKDDILYVDDTL-PNGNFGTWMAWQLDENAQK 1687

  Fly   340 I--GLIPS-----QELEERRKAFVAPEADYVHKIGICGTRISKRKRKTMYRSVANCE-------- 389
            |  |.|||     ||...|.......:.....|......|.|..:||..::..::.:        
Zfish  1688 IQRGQIPSKFMMDQEFYRRHSMTELKDETGSSKTLSAAARRSFFRRKHKHKRSSSKDGKDVVALD 1752

  Fly   390 ---------FDKAELLLYEEVTRMPPFRRKTLVLIG--VSGVGRRTLKNRLINSDVDKFGAVIPH 443
                     .|....|.|:.|.::.....:.::::|  |..|     |:.|:.....||...:  
Zfish  1753 AISTDSIPFLDDCVSLAYQRVQKIDCTSPRPVLILGPLVDPV-----KDMLVKDSPGKFSRCV-- 1810

  Fly   444 TSRPKRALEENGSSYWFMDREEMEEAVRNNEFLEYGEHNGNLYGTHLQSIKDVINSGRMCILDCA 508
                   ||...:|     ::.:|..|::..|::|...:|:...|.:.||.::.:....|:||.|
Zfish  1811 -------LEVMKAS-----QQAIERGVKDFLFIDYKRRSGHFDVTTVASINEITDKDCHCLLDIA 1863

  Fly   509 PNALKILHNSQELMPFVIFVAAPGMEQLKTIYADRRATGSNRNLSFDRQSSI----RFSSRRART 569
            |:|::.|| |..:.|.|||:.....:|:|                 :::..|    :.|.:.::.
Zfish  1864 PHAIERLH-SVHIYPIVIFIRYKNAKQIK-----------------EQKDPIYLRDKVSQKHSKE 1910

  Fly   570 LESLASLYEDDDLVATVEESSFVQRKYEKYFDMVIVNEDFDETFRQVVETLDQMSHEEQWVPV 632
            ...:|...|.|               |.|:|..::....|.....|:|..:||...:..|.|:
Zfish  1911 QFEIAQKIEQD---------------YSKFFTGIVQGGTFPYICTQIVTIVDQEQSKVLWTPL 1958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
variNP_724288.3 L27 <105..128 CDD:280918 121/583 (21%)
PDZ_signaling 173..250 CDD:238492 18/84 (21%)
SH3_MPP 287..347 CDD:212796 21/70 (30%)
Guanylate_kin 408..622 CDD:279019 44/219 (20%)
GuKc 418..622 CDD:214504 42/207 (20%)
dlg5aXP_005156738.1 CARD 9..88 CDD:260018
Takusan 128..211 CDD:282652
Taxilin 295..627 CDD:286771
RILP-like 338..460 CDD:304877
SH3BP5 444..648 CDD:283045
PDZ_signaling 696..783 CDD:238492
PDZ_signaling 793..866 CDD:238492
PDZ 1381..1463 CDD:214570 3/5 (60%)
dbPDZ_assoc 1461..1541 CDD:293216 16/79 (20%)
PDZ 1541..1623 CDD:214570 17/82 (21%)
SH3_DLG5 1639..1701 CDD:212794 21/69 (30%)
Guanylate_kin 1780..1949 CDD:279019 45/220 (20%)
NK 1794..1950 CDD:302627 44/207 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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