Sequence 1: | NP_724288.3 | Gene: | vari / 35343 | FlyBaseID: | FBgn0250785 | Length: | 636 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062525.1 | Gene: | Pals1 / 56217 | MGIID: | 1927339 | Length: | 675 | Species: | Mus musculus |
Alignment Length: | 688 | Identity: | 193/688 - (28%) |
---|---|---|---|
Similarity: | 328/688 - (47%) | Gaps: | 139/688 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 RSRRQARQDKVEL----------LARNNKVNGED----DTSDNAAFRN---STDLSDHDEIF--L 52
Fly 53 KGLLRS-----------------------NSNTPHKELMLNPTEPQPVPLFLPAHLNNKPICDDI 94
Fly 95 IRKFSPSRRLESRELAKLLAQPHFRALLRAHDEIGALYEQRLKAAGGSTSQLE-IASQR------ 152
Fly 153 QTGGYLFTEDVLNTKMPVETIKMVGLRRDPSKPLGLTVELDEFKQLVVARILAGGVIDKQSMLHV 217
Fly 218 GDVILEVNGTPVRTPDELQV--EVSRAKENLTLKIGPNVDEEIKSGRYTVSGGQVKQNGIASLET 280
Fly 281 GKKLTCYMRALFTYNPSEDSLLPCRDIGLPFKSGDILQIINVKDPNWWQAKNITAESDK--IGLI 343
Fly 344 PSQELEERRKAF--VAPEADYVHKIG--ICGTRISKRKRKTMYRSVANCEFDKAELLLYEEVT-- 402
Fly 403 RMPPFRRKTLVLIGVSGVGRRTLKNRLINSDVDKFGAVIPHTSRPKRALEENGSSYWFMDREEME 467
Fly 468 EAVRNNEFLEYGEHNGNLYGTHLQSIKDVINSGRMCILDCAPNALKILHNSQELMPFVIFVAAPG 532
Fly 533 MEQLKTIYADRRATGSNRNLSFDRQSSIRFSSRRARTLESLASLYEDDDLVATVEESSFVQRKYE 597
Fly 598 KYFDMVIVNEDFDETFRQVVETLDQMSHEEQWVPVNWI 635 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vari | NP_724288.3 | L27 | <105..128 | CDD:280918 | 13/22 (59%) |
PDZ_signaling | 173..250 | CDD:238492 | 27/78 (35%) | ||
SH3_MPP | 287..347 | CDD:212796 | 28/61 (46%) | ||
Guanylate_kin | 408..622 | CDD:279019 | 65/213 (31%) | ||
GuKc | 418..622 | CDD:214504 | 61/203 (30%) | ||
Pals1 | NP_062525.1 | Required for the correct localization of PALS1 and PATJ at cell-cell contacts and the normal formation of tight junctions and adherens junctions. /evidence=ECO:0000269|PubMed:17182851 | 1..345 | 76/326 (23%) | |
Interaction with PARD6B. /evidence=ECO:0000269|PubMed:15140881 | 21..140 | 16/72 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 51..79 | 4/11 (36%) | |||
L27_N | 123..170 | CDD:370269 | 6/46 (13%) | ||
Interaction with LIN7C. /evidence=ECO:0000269|PubMed:10753959 | 181..243 | 23/72 (32%) | |||
L27 | 189..237 | CDD:197794 | 19/58 (33%) | ||
PDZ_signaling | 254..333 | CDD:238492 | 27/79 (34%) | ||
SH3_MPP5 | 349..411 | CDD:212969 | 28/61 (46%) | ||
GuKc | 491..661 | CDD:214504 | 61/200 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0194 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |