DRSC/TRiP Functional Genomics Resources

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Protein Alignment vari and MPP2

DIOPT Version :10

Sequence 1:NP_724288.3 Gene:vari / 35343 FlyBaseID:FBgn0250785 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_011523129.2 Gene:MPP2 / 4355 HGNCID:7220 Length:630 Species:Homo sapiens


Alignment Length:651 Identity:237/651 - (36%)
Similarity:347/651 - (53%) Gaps:111/651 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LARNNKVNGEDDTSDN-AAFRNSTDLSDHDEIFLKGLLRS------------------NSNTPHK 65
            :|..|.........|| .:..::|..::.|.|||:|::.|                  |...|.|
Human    57 VAATNSETAMQQVLDNLGSLPSATGAAELDLIFLRGIMESPIVRSLAKVIMVLWFMQQNVFVPMK 121

  Fly    66 ELM--------LNPTEPQPVPLFLPAHLNNKPICDDIIRKFSPSRRLES--RELAKLLAQPHFRA 120
            .::        |..|:.:.|      ..||..:..:|:|..:......|  .|||.:|.:|||::
Human   122 YMLKYFGAHERLEETKLEAV------RDNNLELVQEILRDLAQLAEQSSTAAELAHILQEPHFQS 180

  Fly   121 LLRAHDEIGA-LYEQRLKAAGGSTSQLEIASQRQTGGYLFTEDVLNTKMPVETIKMVGLRRDPSK 184
            ||..||.:.: .||....:.|                  ......|..:|.:.::|||:|:...:
Human   181 LLETHDSVASKTYETPPPSPG------------------LDPTFSNQPVPPDAVRMVGIRKTAGE 227

  Fly   185 PLGLTVELDEFKQLVVARILAGGVIDKQSMLHVGDVILEVNGTPVRT-PDELQVEVSRAKENLTL 248
            .||:|..: |..:||:||||.||::.:|.:|||||:|.||||.||.: |..||..:..|..::.|
Human   228 HLGVTFRV-EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNASGSVIL 291

  Fly   249 KIGPNVDEEIKSGRYTVSGGQVKQNGIASLETGKKLTCYMRALFTYNPSEDSLLPCRDIGLPFKS 313
            ||.|:..|                   ..|.....:.|:    |.|:|:.|||:||::.||.|.:
Human   292 KILPSYQE-------------------PHLPRQVFVKCH----FDYDPARDSLIPCKEAGLRFNA 333

  Fly   314 GDILQIINVKDPNWWQAKNITAESDKIGLIPSQELEERRKAFVAPEADYVHKIG-ICGTRISKRK 377
            ||:|||:|..|.|||||.::  |....||||||.|||:|||||..:.:.....| :||:...|:|
Human   334 GDLLQIVNQDDANWWQACHV--EGGSAGLIPSQLLEEKRKAFVKRDLELTPNSGTLCGSLSGKKK 396

  Fly   378 RKTMYRSVANCEFDKAELLLYEEVTRMPPFRRKTLVLIGVSGVGRRTLKNRLINSDVDKFGAVIP 442
            ::.||.:..|.|||:.|||:||||.||||||||||||||..|||||:|||:||..|.|::|..:|
Human   397 KRMMYLTTKNAEFDRHELLIYEEVARMPPFRRKTLVLIGAQGVGRRSLKNKLIMWDPDRYGTTVP 461

  Fly   443 HTSRPKRALEENGSSYWFMDREEMEEAVRNNEFLEYGEHNGNLYGTHLQSIKDVINSGRMCILDC 507
            :|||..:..|..|..|.|:.|.|||..||...:||:||:.||||||.:.||:.|:.:|::|:||.
Human   462 YTSRRPKDSEREGQGYSFVSRGEMEADVRAGRYLEHGEYEGNLYGTRIDSIRGVVAAGKVCVLDV 526

  Fly   508 APNALKILHNSQELMPFVIFVAAPGMEQLKTIYADRRATGSNRNLSFDRQSSIRFSSRRARTLES 572
            .|.|:|:|..: |.:|:|:|:.||..|.|:.:         ||                 ..|||
Human   527 NPQAVKVLRTA-EFVPYVVFIEAPDFETLRAM---------NR-----------------AALES 564

  Fly   573 LASLYE--DDDLVATVEESSFVQRKYEKYFDMVIVNEDFDETFRQVVETLDQMSHEEQWVPVNWI 635
            ..|..:  :.||..||||||.:||.|..|||:.:||.:.:.|||::...::::..|.|||||:|:
Human   565 GISTKQLTEADLRRTVEESSRIQRGYGHYFDLCLVNSNLERTFRELQTAMEKLRTEPQWVPVSWV 629

  Fly   636 Y 636
            |
Human   630 Y 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
variNP_724288.3 L27 <105..128 CDD:460717 12/24 (50%)
PDZ_MPP6-MPP2-like 174..252 CDD:467268 36/78 (46%)
SH3_MPP 287..347 CDD:212796 29/59 (49%)
Guanylate_kin 408..622 CDD:395500 90/215 (42%)
MPP2XP_011523129.2 L27 67..144 CDD:197794 15/82 (18%)
L27 146..197 CDD:460717 16/50 (32%)
PDZ_MPP6-MPP2-like 217..295 CDD:467268 36/78 (46%)
SH3_MPP2 307..365 CDD:212970 30/63 (48%)
GuKc 437..618 CDD:214504 81/207 (39%)

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