DRSC/TRiP Functional Genomics Resources

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Protein Alignment vari and mpp7a

DIOPT Version :9

Sequence 1:NP_724288.3 Gene:vari / 35343 FlyBaseID:FBgn0250785 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_021335692.1 Gene:mpp7a / 30166 ZFINID:ZDB-GENE-991209-8 Length:621 Species:Danio rerio


Alignment Length:604 Identity:186/604 - (30%)
Similarity:291/604 - (48%) Gaps:146/604 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 ESRELAKLLAQPHFRALLRAHDEIG-ALYEQRLKAAGGSTSQLEIASQRQTGGYLFTEDVLNTKM 168
            |.|||.|||::||.::||..||.:. ..|:..|..                    ..:|:.:.:.
Zfish    91 EIRELVKLLSKPHVKSLLSVHDTVAKKSYDPELPP--------------------LPDDIDDEED 135

  Fly   169 PVETIKMVGLRRDPSKPLGLTVELDEFK-QLVVARILAGGVIDKQSMLHVGDVILEVNGTPV--R 230
            .|:.|::|    ...:|||.|::.||.. .::|||||.||..|:..::||||.:.||||.||  :
Zfish   136 SVKIIRLV----KNKEPLGATIKKDEHTGAILVARILRGGAADRSGLIHVGDELKEVNGIPVDDK 196

  Fly   231 TPDELQVEVSRAKENLTLKIGPNVDEEIKSGRYTVSGGQVKQNGIASLETGKKLTCYMRALFTYN 295
            .|:|:...:|:::..:|.|:.|.:.:|.:|                     |:...:::|||.||
Zfish   197 KPEEIIRILSQSQGAITFKVVPGIKDEAQS---------------------KEPKMFIKALFDYN 240

  Fly   296 PSEDSLLPCRDIGLPFKSGDILQIINVKDPNWWQAKNITAESD---KIGLIPSQELEERRKAFVA 357
            |:||..:||::.||.||.|||||:::..|..|||||   .|.|   :.|||||:..:|||.|...
Zfish   241 PAEDKAIPCKEAGLGFKKGDILQVMSQDDATWWQAK---LEGDGNLRAGLIPSKHFQERRLAVWR 302

  Fly   358 PE------------------------------ADYVHKIGICGT----RISKRKRKT---MYRSV 385
            |.                              |.|:..:.:.|.    |:|:|.:||   ||...
Zfish   303 PTPVMTLQRTSSKRFYDDTVNCVEDIEEENEFASYLSGLHVAGLRRSFRLSRRDKKTNKSMYECK 367

  Fly   386 ANCEFDKAELLLYEEVTRMPPFRRK------TLVLIGVSGVGRRTLKNRLINSDVDKFGAVIPHT 444
            .:.::|.|::..|||||   .:|||      .:||:|.:|||...||.:|:.||...|...||||
Zfish   368 KSEQYDTADVPTYEEVT---TYRRKHGDRHRLVVLVGPTGVGLNELKRKLLISDTQHFSVTIPHT 429

  Fly   445 SRPKRALEENGSSYWFMDREEMEEAVRNNE-------------------FLEYGEHNGNLYGTHL 490
            ||.||..|..|..|.|:.:...|..::||:                   |:|:||:.||.|||..
Zfish   430 SRSKRHQESEGVEYHFISKNLFEADIQNNKKSGYSCFWRSSLPVLQRNRFIEHGEYKGNYYGTSF 494

  Fly   491 QSIKDVINSGRMCILDCAPNALKILHNSQELMPFVIFVAAPGMEQLKTIYADRRATGSNRNL--- 552
            .|::.|::..::|:||..|:.||.|..: |..|:|:||..|.:|:|       |.|..|..:   
Zfish   495 DSVRSVLSKNKVCLLDVQPHTLKHLRTA-EFKPYVVFVKPPCIERL-------RETRRNAKVISG 551

  Fly   553 SFDRQSSIRFSSRRARTLESLASLYEDDDLVATVEESSFVQRKYEKYFDMVIVNEDFDETFRQVV 617
            ..|:.||..||               ::|.:..:..|..::.:|...|:.||||:|....|.::.
Zfish   552 KDDKTSSKAFS---------------EEDFLEMISASQMMENQYGHLFEKVIVNDDLTVAFSELK 601

  Fly   618 ETLDQMSHEEQWVPVNWIY 636
            :.|.::..|..|||::|.:
Zfish   602 QALKKVETEAHWVPISWTH 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
variNP_724288.3 L27 <105..128 CDD:280918 13/22 (59%)
PDZ_signaling 173..250 CDD:238492 30/79 (38%)
SH3_MPP 287..347 CDD:212796 32/62 (52%)
Guanylate_kin 408..622 CDD:279019 75/241 (31%)
GuKc 418..622 CDD:214504 69/225 (31%)
mpp7aXP_021335692.1 L27 12..68 CDD:197794
L27 74..125 CDD:197794 15/33 (45%)
PDZ_signaling 137..217 CDD:238492 32/83 (39%)
SH3 232..292 CDD:327375 32/62 (52%)
GuKc 403..608 CDD:214504 69/227 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594317
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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