DRSC/TRiP Functional Genomics Resources

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Protein Alignment vari and DLG1

DIOPT Version :9

Sequence 1:NP_724288.3 Gene:vari / 35343 FlyBaseID:FBgn0250785 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_004078.2 Gene:DLG1 / 1739 HGNCID:2900 Length:926 Species:Homo sapiens


Alignment Length:665 Identity:168/665 - (25%)
Similarity:293/665 - (44%) Gaps:164/665 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ELLARNNKVNGEDDTSDNA--AFRNSTDLSDHDEIFLKGLLRSNSNTPHKELMLNPTEPQPVPLF 80
            :|||.|| |..|:.|.:.|  |.:|::|.     ::||              :..||.......:
Human   370 KLLAVNN-VCLEEVTHEEAVTALKNTSDF-----VYLK--------------VAKPTSMYMNDGY 414

  Fly    81 LPAHLNN---KPICDDIIRKFSPSRRLESRELAKLLAQPHFRALLRAHDEIGALYEQRLKAAGGS 142
            .|..:.|   :|:.:.:    |||..|.....:.....|..:|:| ..|||              
Human   415 APPDITNSSSQPVDNHV----SPSSFLGQTPASPARYSPVSKAVL-GDDEI-------------- 460

  Fly   143 TSQLEIASQRQTGGYLFTEDVLNTKMPVETIKMVGLRRDPSKPLGLT-VELDEFKQLVVARILAG 206
                                   |:.|    :.|.|.|. |..||.. |..::.:.:.::.||||
Human   461 -----------------------TREP----RKVVLHRG-STGLGFNIVGGEDGEGIFISFILAG 497

  Fly   207 GVIDKQSMLHVGDVILEVNGTPVR--TPDELQVEVSRAKENLTLKIGPNVDE------EIKSGRY 263
            |..|....|..||.|:.||...:|  :.::....:..|.:.:|:......:|      :|...|.
Human   498 GPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLRE 562

  Fly   264 TVSGGQVKQNGIASLETGKKLTCYMRALFTYNPSEDSLLPCRDIGLPFKSGDILQIINVKDPNWW 328
            .:....: .:|..||.|.:|.:.|:||||.|:.::||.||.:  ||.||.||||.:||..|..||
Human   563 QMMNSSI-SSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQ--GLNFKFGDILHVINASDDEWW 624

  Fly   329 QAKNIT--AESDKIGLIPSQELEERRKAFVAPEADYVHKIGICGTRISKRKRKTM-------YRS 384
            ||:.:|  .|||::|:|||:...|:::........:..|....|...:.:::|.:       |::
Human   625 QARQVTPDGESDEVGVIPSKRRVEKKERARLKTVKFNSKTRDKGQSFNDKRKKNLFSRKFPFYKN 689

  Fly   385 VANCEFDKAE----------------------LLLYEEVTRMPPFRRKTLVLIGVSGVGRRTLKN 427
            ....|.:.::                      :|.||.|.:......:.::::|       .:|:
Human   690 KDQSEQETSDADQHVTSNASDSESSYRGQEEYVLSYEPVNQQEVNYTRPVIILG-------PMKD 747

  Fly   428 RLINSDV-----DKFGAVIPHTSRPKRALEENGSSYWFM-DREEMEEAVRNNEFLEYGEHNGNLY 486
            | ||.|:     ||||:.:|||:||||..|.:|..|.|: .||:||:.::.::|:|.|::|.:||
Human   748 R-INDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHLY 811

  Fly   487 GTHLQSIKDVINSGRMCILDCAPNALKILHNSQELMPFVIFVAAPGMEQLKTIYADRRATGSNRN 551
            ||.:||:::|...|:.||||.:.||:|.|..:| |.|..||:....||.:               
Human   812 GTSVQSVREVAEKGKHCILDVSGNAIKRLQIAQ-LYPISIFIKPKSMENI--------------- 860

  Fly   552 LSFDRQSSIRFSSRRARTLESLASLYEDDDLVATVEESSFVQRKYEKYFDMVIVNEDFDETFRQV 616
                .:.:.|.:..:||               .|.|.:..:::::.::|..::..:..::.:.||
Human   861 ----MEMNKRLTEEQAR---------------KTFERAMKLEQEFTEHFTAIVQGDTLEDIYNQV 906

  Fly   617 VETLDQMSHEEQWVP 631
            .:.:::.|....|||
Human   907 KQIIEEQSGSYIWVP 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
variNP_724288.3 L27 <105..128 CDD:280918 4/22 (18%)
PDZ_signaling 173..250 CDD:238492 22/79 (28%)
SH3_MPP 287..347 CDD:212796 33/61 (54%)
Guanylate_kin 408..622 CDD:279019 60/219 (27%)
GuKc 418..622 CDD:214504 59/209 (28%)
DLG1NP_004078.2 L27_1 2..62 CDD:370268
MAGUK_N_PEST 106..223 CDD:371162
PDZ_signaling 224..308 CDD:238492
PDZ_signaling 317..403 CDD:238492 14/52 (27%)
PDZ_assoc 404..465 CDD:371157 17/106 (16%)
PDZ 463..547 CDD:214570 23/88 (26%)
SH3_DLG1 582..648 CDD:212964 33/67 (49%)
Guanylate_kin 735..913 CDD:366206 60/220 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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