DRSC/TRiP Functional Genomics Resources

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Protein Alignment vari and dlg5b.1

DIOPT Version :9

Sequence 1:NP_724288.3 Gene:vari / 35343 FlyBaseID:FBgn0250785 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_021336124.1 Gene:dlg5b.1 / 101883945 ZFINID:ZDB-GENE-120206-4 Length:1907 Species:Danio rerio


Alignment Length:554 Identity:116/554 - (20%)
Similarity:212/554 - (38%) Gaps:155/554 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 HDEIGALYEQ--------RLKAAGGSTSQLEIASQRQTGGYLFTEDVLNTKMPVETIKMVGLRRD 181
            |..|..|.||        ..:|...|:...|.|..||         ||..|.||:    :|:|..
Zfish  1458 HSNIDTLSEQDEGTMTPPSKQATPTSSPH
RERAEPRQ---------VLLRKTPVD----LGMRIC 1509

  Fly   182 PSKPLGLTVE-LDEFKQLVVARILAGGVIDKQSMLHVGDVILEVNGTPV--RTPDELQVEVSRAK 243
            .....|:.|| |::           ||.    ..|..||:|||.|...:  :|.:|:.:|:.:..
Zfish  1510 GGNLTGVFVEDLED-----------GGA----HGLQPGDLILECNSVSMKSKTAEEVYLELLKPA 1559

  Fly   244 ENLTLKIGPNVDEEIKSGRYTVSGGQVKQNGIASLETGKKLTCYMRALFTY-NPSEDSLLPCRDI 307
            ||:.|:: .|..:..:..:.|...|                 .|:||||.: ..||..       
Zfish  1560 ENIVLRV-Q
NRPQHFRRAKDTPGDG-----------------FYIRALFDHVGDSEQE------- 1599

  Fly   308 GLPFKSGDILQIINV---KDPNWWQAKNITAESDKI--GLIPSQ---ELEERRKAFVAPEADYVH 364
             |.||..|||.:.:.   .:..:|.|..:...:.|:  |.:||:   :.:.:|:..|....|   
Zfish  1600 -LSFKKDDILYVDDTLPRGNFGYWLAWQLDENAQKLMRGHVPSKCMMDQDSQRRYSVTDGKD--- 1660

  Fly   365 KIGICGTRISKRKRKTMYR---------SVANCEFDKAELL--------------LYEEVTRMPP 406
            :.| .|..:|...|::.:|         |....:...|:.:              .|:.|.::..
Zfish  1661 ESG-SGKTLSAAARRSFFRRKLKHKRSTSKDGRDAPAADAISTDSMPYLEDCVSPAYQRVLKVES 1724

  Fly   407 FRRKTLVLIGVSGVGRRTLKNRLINSDVDKFGAVIPHTSRPKRALEENGSSYWFMDREEMEEAVR 471
            ..|:.::::|..   ...:|:.|:.....|:...:|...:.:              ::.:|..|:
Zfish  1725 TNRRPVLILGPL---VEPIKDMLLREAPGKYCRCLPEGMKAQ--------------QQAIERGVK 1772

  Fly   472 NNEFLEYGEHNGNLYGTHLQSIKDVINSGRMCILDCAPNALKILHNSQELMPFVIFVAAPGMEQL 536
            :..|::|...:|:...|.:.|||::......|:||.||:|::.|| :..:.|.|||:.....:|:
Zfish  1773 DCLFIDYKRRSGHFDVTTVASIKEITEKDCHCLLDIAPHAIERLH-AVSIYPIVIFIRYRNAKQI 1836

  Fly   537 K----TIYADRRATGSNRNLSFDRQSSIRFSSRRARTLESLASLYEDDDLVATVEESSFVQRKYE 597
            |    .:|.        |:....:.|..:|                        |.:..:::.|.
Zfish  1837 KEQKDPVYL--------RDKVSQKHSKEQF------------------------ESAQRIEQDYS 1869

  Fly   598 KYFDMVIVNEDFDETFRQVVETLDQMSHEEQWVP 631
            |||..|:.......|..|::..:||..::..|:|
Zfish  1870 KYFTGVVQAGALSNTCTQIMAIVDQEQNKVLWIP 1903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
variNP_724288.3 L27 <105..128 CDD:280918 1/2 (50%)
PDZ_signaling 173..250 CDD:238492 21/79 (27%)
SH3_MPP 287..347 CDD:212796 19/68 (28%)
Guanylate_kin 408..622 CDD:279019 41/217 (19%)
GuKc 418..622 CDD:214504 39/207 (19%)
dlg5b.1XP_021336124.1 Takusan 120..209 CDD:309799
APG6 232..>311 CDD:309295
SMC_N <287..661 CDD:330553
PDZ_signaling 686..774 CDD:238492
PDZ_signaling <797..857 CDD:238492
PDZ 1345..1426 CDD:214570
dbPDZ_assoc 1425..1486 CDD:318751 7/27 (26%)
PDZ 1491..1567 CDD:214570 28/104 (27%)
SH3_DLG5 1585..1647 CDD:212794 19/69 (28%)
NK 1740..1896 CDD:327404 41/202 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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