DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pomp and UMP1

DIOPT Version :10

Sequence 1:NP_610057.1 Gene:Pomp / 35342 FlyBaseID:FBgn0032884 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_009732.1 Gene:UMP1 / 852471 SGDID:S000000377 Length:148 Species:Saccharomyces cerevisiae


Alignment Length:116 Identity:31/116 - (26%)
Similarity:48/116 - (41%) Gaps:9/116 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GRVGMPTEANCLNQLAHVHRLRDSELNYNEHQYNRNMQMLRNHEGLGVPLKMGMERFAARQVGRL 84
            |.|.:.|      ||...|.|..:..|:...|..|.|:..|...|:..|:|..||.....:....
Yeast    39 GAVPLST------QLNDRHPLESTLKNWETTQRQRQMEQYRQIFGIAEPMKRTMEMEIVNRTDFN 97

  Fly    85 PFLSSSNFMDDVLTGRCDSIGFEDF---MNLPENSEHMRQPHAVVEKSLGI 132
            |..::.:...|:|..:..||.:||.   ..|..::......|:.:||.|||
Yeast    98 PLSTNGSIHRDILLNKECSIDWEDVYPGTGLQASTMVGDDVHSKIEKQLGI 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PompNP_610057.1 UMP1 15..130 CDD:461627 28/112 (25%)
UMP1NP_009732.1 UMP1 27..146 CDD:461627 28/112 (25%)

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