DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pomp and pomp

DIOPT Version :10

Sequence 1:NP_610057.1 Gene:Pomp / 35342 FlyBaseID:FBgn0032884 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001005093.1 Gene:pomp / 448670 XenbaseID:XB-GENE-5914496 Length:142 Species:Xenopus tropicalis


Alignment Length:101 Identity:48/101 - (47%)
Similarity:62/101 - (61%) Gaps:0/101 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 NQLAHVHRLRDSELNYNEHQYNRNMQMLRNHEGLGVPLKMGMERFAARQVGRLPFLSSSNFMDDV 96
            ::|...|.|..||.|:..:|...|:..:||.:||..|||:.||..|.|||.|||||.|||...|.
 Frog    41 SELMPSHPLELSEKNFQINQEKVNLSTVRNIQGLHAPLKLQMEFKAVRQVQRLPFLPSSNIALDT 105

  Fly    97 LTGRCDSIGFEDFMNLPENSEHMRQPHAVVEKSLGI 132
            |.|..:||||||.:|.|..||.|.:||.::|..||:
 Frog   106 LRGTDESIGFEDILNDPSQSEGMGEPHLMMEYKLGL 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PompNP_610057.1 UMP1 15..130 CDD:461627 46/97 (47%)
pompNP_001005093.1 UMP1 26..139 CDD:461627 46/97 (47%)

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