DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pomp and Y57E12AL.6

DIOPT Version :10

Sequence 1:NP_610057.1 Gene:Pomp / 35342 FlyBaseID:FBgn0032884 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_504792.1 Gene:Y57E12AL.6 / 179092 WormBaseID:WBGene00021959 Length:130 Species:Caenorhabditis elegans


Alignment Length:113 Identity:28/113 - (24%)
Similarity:45/113 - (39%) Gaps:18/113 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYQPSLKVQPAEVSVLNATGRVGMPTEANCLNQLAHVHRLRDSELNYNEHQYNRNMQMLRNHEGL 65
            |.:|:::.:|.|.           |...|  |.:||......|.:|.....|....::|..:...
 Worm    27 MQRPTVEKKPTEA-----------PKMPN--NVVAHELLADGSRMNPKIENYLNAQRLLSGNAQA 78

  Fly    66 GVPLKMGMERFAARQVGRLP--FLSSSNFMDDVLTGRCDSIGFEDFMN 111
            ...|   :|..:|.|:.|.|  ...||....|:|..|.:||...|::|
 Worm    79 EQRL---LELNSAAQINRGPDGVFQSSRLHFDMLLNRDESIFPSDYLN 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PompNP_610057.1 UMP1 15..130 CDD:461627 24/99 (24%)
Y57E12AL.6NP_504792.1 UMP1 <81..128 CDD:461627 15/46 (33%)

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