Protein Alignment cad and HAT2

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_199548.1
• Gene: HAT2 / 834784
• AraportID: AT5G47370
• Length: 283
• Species: Arabidopsis thaliana
• Alignment Length: 184
• Identity: 42/184 - (22%)
• Similarity: 70/184 - (38%)
• Gaps: 66/184 - (35%)

  Fly   222 NNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLS---------------- 270
            :.|::| ...|.|.|:|:|||.:..|....:           .|..||.
plant    17 SQNHNP-LQMNLNPNSSLSNNLQRLPWNQTF-----------DPTSDLRKIDVNSFPSTVNCEED 69

  Fly   271 ---SSPNL------------------------EDLSDLLDASGKTR-TKD---------KYRVVY 298
               ||||.                        :|..::....|.:| |.|         :.::..
plant    70 TGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRL 134

  Fly   299 TDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKER-KQNK 351
            :..|...||:.:.....:..::|..||:.|:|:.|||::|||||||:.: ||.:
plant   135 SKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTE 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	18/55 (33%)
HAT2	NP_199548.1	HD-ZIP_N	8..91	CDD:461370	17/85 (20%)
		HOX	129..183	CDD:197696	18/53 (34%)
		HALZ	185..228	CDD:128634	2/4 (50%)